RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 HHLA3Q9XRX5 114 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 SOX21Q9Y651 276 aaPredicted RBP1.61□□□□□ -2.15
HERC4-215ENST00000515753 LHFPL6Q9Y693 200 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 HEATR5BQ9P2D3 2071 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 CENPEQ02224 2701 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 UTP20O75691 2785 aaKnown RBP1.61□□□□□ -2.15
HERC4-215ENST00000515753 PLXNB1O43157 2135 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 STAB1Q9NY15 2570 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 COL6A5A8TX70 2615 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 ABCA1O95477 2261 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 AKAP6Q13023 2319 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 KIAA1549Q9HCM3 1950 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 IGHV3-64A0A075B6Q5 118 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 TRGV10A0A0A0MS01 117 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 IGKV2-24A0A0C4DH68 120 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 A0A0D9SG52 128 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 A0A0G2JND7 137 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 RFPL4AA6NLU0 287 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 TMEM212A6NML5 194 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 ODF3BA8MYP8 253 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 RFPL4AL1F8VTS6 287 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 H7C2G1 150 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 K7EIL1 84 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 CDC42EP2O14613 210 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 GGCTO75223 188 aaKnown RBP1.6□□□□□ -2.15
HERC4-215ENST00000515753 TCL1BO95988 128 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 EIF5AP63241 154 aaKnown RBP1.6□□□□□ -2.15
HERC4-215ENST00000515753 GLYATL3Q5SZD4 288 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 SAMD13Q5VXD3 122 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 HAGHLQ6PII5 290 aaPredicted RBP1.6□□□□□ -2.15
HERC4-215ENST00000515753 ZNF826PQ6ZT77 177 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 SLC35E3Q7Z769 313 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 Q8NDZ9 215 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 OR51T1Q8NGJ9 327 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 OR8D4Q8NGM9 314 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 OR10J5Q8NHC4 309 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 GRPEL2Q8TAA5 225 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 MBD3L1Q8WWY6 194 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 DNAJC9Q8WXX5 260 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 AQP3Q92482 292 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 TMEM106AQ96A25 262 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 MRPS24Q96EL2 167 aaKnown RBP1.6□□□□□ -2.15
HERC4-215ENST00000515753 GAFA1Q96PS6 74 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 YPEL2Q96QA6 119 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 OSTCQ9NRP0 149 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 CKLFQ9UBR5 152 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 LINC00312Q9Y6C7 94 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 DNAJC13O75165 2243 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 FLNAP21333 2647 aaKnown RBP1.6□□□□□ -2.15
HERC4-215ENST00000515753 ATRQ13535 2644 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 CELSR1Q9NYQ6 3014 aa1.6□□□□□ -2.15
HERC4-215ENST00000515753 NIPBLQ6KC79 2804 aaeCLIP1.59□□□□□ -2.15
HERC4-215ENST00000515753 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.15
HERC4-215ENST00000515753 MPDZO75970 2070 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 TRBV10-2A0A0K0K1G8 114 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 LCE6AA0A183 80 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 MEIS3P1A6NDR6 274 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 ARRDC5A6NEK1 342 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 FXYD1O00168 92 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 TAX1BP3O14907 124 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 EDF1O60869 148 aaKnown RBP1.59□□□□□ -2.15
HERC4-215ENST00000515753 SNRNP200O75643 2136 aaKnown RBP1.59□□□□□ -2.15
HERC4-215ENST00000515753 FAM107AO95990 144 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 CTSGP08311 255 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 FUSP35637 526 aaKnown RBP eCLIP1.59□□□□□ -2.15
HERC4-215ENST00000515753 RBP2P50120 134 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 EDDM3BP56851 147 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 BLCAPP62952 87 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 ZNF90Q03938 601 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 KLRD1Q13241 179 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 KISS1Q15726 138 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 LTC4SQ16873 150 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 BCL2L15Q5TBC7 163 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 HCP5Q6MZN7 132 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 HEPN1Q6WQI6 88 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 ANGPTL5Q86XS5 388 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 BPIFA4PQ86YQ2 179 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 OTOSQ8NHW6 89 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 THEM6Q8WUY1 208 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 PP6455Q8WZ26 134 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 ISOC1Q96CN7 298 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 TVP23CQ96ET8 276 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 ADAT3Q96EY9 351 aaPredicted RBP1.59□□□□□ -2.15
HERC4-215ENST00000515753 BORCS8Q96FH0 119 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 OR4C12Q96R67 309 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 HSPB9Q9BQS6 159 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 Q9BRP9 147 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 YIPF3Q9GZM5 350 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 SAR1AQ9NR31 198 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 CMC2Q9NRP2 79 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 NDUFB11Q9NX14 153 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 EPDR1Q9UM22 224 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 NUBP2Q9Y5Y2 271 aa1.59□□□□□ -2.15
HERC4-215ENST00000515753 NINQ8N4C6 2090 aa1.59□□□□□ -2.16
HERC4-215ENST00000515753 FREM1Q5H8C1 2179 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 RTTNQ86VV8 2226 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 IGLV10-54A0A075B6I4 117 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 MUC21A0A0G2JKD1 596 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 MUC21A0A140T8X8 626 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 C1orf196B1AJZ1 125 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms