RNA–Protein interactions for RNA: ENST00000515737.5

SH3BP2-228, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-228ENST00000515737 LEPROTL1O95214 131 aa12.32□□□□□ -0.44
SH3BP2-228ENST00000515737 RPL35AP18077 110 aaKnown RBP12.32□□□□□ -0.44
SH3BP2-228ENST00000515737 IGHV3OR16-12A0A075B7B8 117 aa12.31□□□□□ -0.44
SH3BP2-228ENST00000515737 C1orf158Q8N1D5 194 aa12.31□□□□□ -0.44
SH3BP2-228ENST00000515737 FAM74A4Q5TZK3 123 aa12.31□□□□□ -0.44
SH3BP2-228ENST00000515737 LINC00467Q9BRT7 94 aa12.31□□□□□ -0.44
SH3BP2-228ENST00000515737 GSN-AS1Q9NRJ2 163 aa12.31□□□□□ -0.44
SH3BP2-228ENST00000515737 LINC00173Q6ZV60 143 aa12.3□□□□□ -0.44
SH3BP2-228ENST00000515737 RASL10AQ92737 203 aa12.3□□□□□ -0.44
SH3BP2-228ENST00000515737 NXT2Q9NPJ8 142 aaKnown RBP12.3□□□□□ -0.44
SH3BP2-228ENST00000515737 ZNF415Q09FC8 603 aa12.3□□□□□ -0.44
SH3BP2-228ENST00000515737 DEFB125Q8N687 156 aa12.3□□□□□ -0.44
SH3BP2-228ENST00000515737 POM121L12Q8N7R1 296 aa12.3□□□□□ -0.44
SH3BP2-228ENST00000515737 F5H697 171 aa12.29□□□□□ -0.44
SH3BP2-228ENST00000515737 GIG44P09565 113 aaPredicted RBP12.29□□□□□ -0.44
SH3BP2-228ENST00000515737 S100A12P80511 92 aa12.29□□□□□ -0.44
SH3BP2-228ENST00000515737 GTSCR1Q86UQ5 136 aa12.29□□□□□ -0.44
SH3BP2-228ENST00000515737 RPL39LQ96EH5 51 aaKnown RBP12.29□□□□□ -0.44
SH3BP2-228ENST00000515737 A0A096LNJ9 63 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 CRYGDP07320 174 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 Q8N8P6 123 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 C11orf72Q8NBR9 251 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 IGLV2-18A0A075B6J9 118 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 AZU1P20160 251 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 Q8N976 141 aa12.28□□□□□ -0.44
SH3BP2-228ENST00000515737 M0R2P5 195 aa12.27□□□□□ -0.44
SH3BP2-228ENST00000515737 SUMO2P61956 95 aaKnown RBP12.27□□□□□ -0.45
SH3BP2-228ENST00000515737 SUMO4Q6EEV6 95 aa12.27□□□□□ -0.45
SH3BP2-228ENST00000515737 WFDC9Q8NEX5 89 aa12.27□□□□□ -0.45
SH3BP2-228ENST00000515737 HSPB8Q9UJY1 196 aa12.27□□□□□ -0.45
SH3BP2-228ENST00000515737 COL6A5A8TX70 2615 aa12.27□□□□□ -0.45
SH3BP2-228ENST00000515737 LINC01546A6NGU7 62 aa12.26□□□□□ -0.45
SH3BP2-228ENST00000515737 TMEM70Q9BUB7 260 aa12.26□□□□□ -0.45
SH3BP2-228ENST00000515737 HBDP02042 147 aa12.26□□□□□ -0.45
SH3BP2-228ENST00000515737 MCRIP2Q9BUT9 160 aaKnown RBP12.26□□□□□ -0.45
SH3BP2-228ENST00000515737 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
SH3BP2-228ENST00000515737 PPP1R17O96001 155 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 IGLL1P15814 213 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 ZNF56Q15929 161 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 C20orf78Q9BR46 151 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 C1QTNF4Q9BXJ3 329 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 MORN3Q6PF18 240 aaPredicted RBP12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 PRIMA1Q86XR5 153 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 SPXQ9BT56 116 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 ZNF747Q9BV97 191 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 MAP1LC3CQ9BXW4 147 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 GOLT1BQ9Y3E0 138 aa12.25□□□□□ -0.45
SH3BP2-228ENST00000515737 SYS1-DBNDD2H3BUS1 97 aa12.24□□□□□ -0.45
SH3BP2-228ENST00000515737 TCAPO15273 167 aa12.24□□□□□ -0.45
SH3BP2-228ENST00000515737 ZNF664Q8N3J9 261 aa12.24□□□□□ -0.45
SH3BP2-228ENST00000515737 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
SH3BP2-228ENST00000515737 TEX43Q6ZNM6 134 aa12.24□□□□□ -0.45
SH3BP2-228ENST00000515737 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 SPATA12Q7Z6I5 190 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 C3orf56Q8N813 242 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 CSNK1G2-AS1Q8NCQ2 148 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 PRO1933Q9H354 126 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 MRPL16Q9NX20 251 aaKnown RBP12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 A8MWV9 139 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 FCER1GP30273 86 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 LAGE3Q14657 143 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 PTH2Q96A98 100 aa12.23□□□□□ -0.45
SH3BP2-228ENST00000515737 IGHV3-73A0A0B4J1V6 119 aa12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 H0Y8G0 127 aa12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 PKD1L1Q8TDX9 2849 aa12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 M0QY20 66 aa12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 TMEM263Q8WUH6 116 aaKnown RBP12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 TMEM158Q8WZ71 300 aa12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 CSTL1Q9H114 145 aa12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 ST20Q9HBF5 79 aa12.22□□□□□ -0.45
SH3BP2-228ENST00000515737 ATOH7Q8N100 152 aa12.21□□□□□ -0.46
SH3BP2-228ENST00000515737 PKIAP61925 76 aa12.2□□□□□ -0.46
SH3BP2-228ENST00000515737 CFAP126Q5VTH2 177 aa12.2□□□□□ -0.46
SH3BP2-228ENST00000515737 ZNF705AQ6ZN79 300 aaPredicted RBP12.2□□□□□ -0.46
SH3BP2-228ENST00000515737 VAMP8Q9BV40 100 aa12.2□□□□□ -0.46
SH3BP2-228ENST00000515737 TSTD3H0UI37 97 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 PET117Q6UWS5 81 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 C18orf15Q96N68 181 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 PAM16Q9Y3D7 125 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 SDHAF1A6NFY7 115 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 UFSP1Q6NVU6 142 aa12.19□□□□□ -0.46
SH3BP2-228ENST00000515737 TRGV1A0A0A0MS02 117 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 WIPF1O43516 503 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 NUDT3O95989 172 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 TRBV6-5A0A0K0K1A5 114 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 C20orf202A1L168 122 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 RRN3P1Q2M238 152 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 ORMDL2Q53FV1 153 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 SHISA2Q6UWI4 295 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
SH3BP2-228ENST00000515737 RPL32P62910 135 aaKnown RBP12.17□□□□□ -0.46
SH3BP2-228ENST00000515737 K7EMI3 77 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms