RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 RNASEKQ6P5S7 137 aaKnown RBP6.9□□□□□ -1.3
TPM3-222ENST00000515609 NIT1Q86X76 327 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 CSNK1G2-AS1Q8NCQ2 148 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.3
TPM3-222ENST00000515609 ATRQ13535 2644 aa6.9□□□□□ -1.31
TPM3-222ENST00000515609 SORL1Q92673 2214 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 ZFHX3Q15911 3703 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 FABP4P15090 132 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 AMTP48728 403 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 RPL32P62910 135 aaKnown RBP6.89□□□□□ -1.31
TPM3-222ENST00000515609 ZNF56Q15929 161 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 C11orf72Q8NBR9 251 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 RNF185Q96GF1 192 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 EDA2RQ9HAV5 297 aa6.89□□□□□ -1.31
TPM3-222ENST00000515609 GIG44P09565 113 aaPredicted RBP6.88□□□□□ -1.31
TPM3-222ENST00000515609 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 MIFP14174 115 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 AZU1P20160 251 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 SUMO2P61956 95 aaKnown RBP6.88□□□□□ -1.31
TPM3-222ENST00000515609 OXLD1Q5BKU9 147 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 FAM74A4Q5TZK3 123 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 OR4C5Q8NGB2 326 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 KIR2DL4Q99706 377 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 HIST1H2BLQ99880 126 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 ST20Q9HBF5 79 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 HSPB8Q9UJY1 196 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 TP53TG1Q9Y2A0 90 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 AGRNO00468 2067 aa6.88□□□□□ -1.31
TPM3-222ENST00000515609 TRGV2A0A075B6R0 118 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 TRGV1A0A0A0MS02 117 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 LYRM9A8MSI8 78 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 VCYO14598 125 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 NPYP01303 97 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 CRYGDP07320 174 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 SMIM6P0DI80 62 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 ORMDL2Q53FV1 153 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 PDZD11Q5EBL8 140 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 Q8N8P6 123 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 DNAJC30Q96LL9 226 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 NIT2Q9NQR4 276 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
TPM3-222ENST00000515609 A0A087WWL8 130 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 TRAV4A0A0B4J268 109 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 TRBV6-5A0A0K0K1A5 114 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 RS1O15537 224 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 SPRY2O43597 315 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 IQCJQ1A5X6 159 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 OR10D4PQ8NGN7 298 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 IL17DQ8TAD2 202 aa6.86□□□□□ -1.31
TPM3-222ENST00000515609 TRBV10-1A0A0K0K1A3 114 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 C20orf202A1L168 122 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 LEPROTL1O95214 131 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 NCR2O95944 276 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 HBDP02042 147 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 IFI27P40305 119 aaPredicted RBP6.85□□□□□ -1.31
TPM3-222ENST00000515609 LAGE3Q14657 143 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 SAMD5Q5TGI4 173 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 CFAP126Q5VTH2 177 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 SUMO4Q6EEV6 95 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 NRACQ8N912 160 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 SPATA3Q8NHX4 192 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 RNF183Q96D59 192 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 C18orf15Q96N68 181 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 SMIM2Q9BVW6 85 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
TPM3-222ENST00000515609 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
TPM3-222ENST00000515609 SMKR1H3BMG3 65 aa6.84□□□□□ -1.31
TPM3-222ENST00000515609 M0QY20 66 aa6.84□□□□□ -1.31
TPM3-222ENST00000515609 LINC00315P59091 139 aa6.84□□□□□ -1.31
TPM3-222ENST00000515609 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
TPM3-222ENST00000515609 OR11H2Q8NH07 326 aa6.84□□□□□ -1.31
TPM3-222ENST00000515609 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
TPM3-222ENST00000515609 MRPL16Q9NX20 251 aaKnown RBP6.84□□□□□ -1.31
TPM3-222ENST00000515609 TRAV26-2A0A0B4J265 109 aa6.83□□□□□ -1.32
TPM3-222ENST00000515609 TRBV27A0A0K0K1C4 114 aa6.83□□□□□ -1.32
TPM3-222ENST00000515609 ATP5LO75964 103 aa6.83□□□□□ -1.32
TPM3-222ENST00000515609 FCER1GP30273 86 aa6.83□□□□□ -1.32
TPM3-222ENST00000515609 S100A12P80511 92 aa6.83□□□□□ -1.32
TPM3-222ENST00000515609 RPL36AP83881 106 aaKnown RBP6.83□□□□□ -1.32
TPM3-222ENST00000515609 DEFB135Q30KP9 77 aa6.83□□□□□ -1.32
TPM3-222ENST00000515609 RPL36ALQ969Q0 106 aaKnown RBP6.83□□□□□ -1.32
TPM3-222ENST00000515609 PRADC1Q9BSG0 188 aa6.83□□□□□ -1.32
TPM3-222ENST00000515609 TRGV4A0A0C4DH28 118 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 IGHV1-24A0A0C4DH33 117 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 TRBV6-4A0A1B0GX49 114 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 SDHAF1A6NFY7 115 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 I3L3M4 83 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 SPART-AS1P0CW21 52 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
TPM3-222ENST00000515609 KRTAP10-11P60412 298 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 JOSD1Q15040 202 aaPredicted RBP6.82□□□□□ -1.32
TPM3-222ENST00000515609 RHOHQ15669 191 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 Q6ZTI0 123 aa6.82□□□□□ -1.32
TPM3-222ENST00000515609 TMEM70Q9BUB7 260 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms