RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ESDP10768 282 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 PMCHP20382 165 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 FAM74A4Q5TZK3 123 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 PACRGQ96M98 296 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-213ENST00000515418 DPH3P1Q9H4G8 78 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 IGHV3-73A0A0B4J1V6 119 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 WIPF1O43516 503 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 CRYGDP07320 174 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 LINC00614P0C842 121 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 XP32Q5T750 250 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 MORN3Q6PF18 240 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-213ENST00000515418 PRSS3P2Q8NHM4 247 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 TMEM18Q96B42 140 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 RPL39LQ96EH5 51 aaKnown RBP6.62□□□□□ -1.35
CPNE4-213ENST00000515418 AP1S3Q96PC3 154 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 LINC00467Q9BRT7 94 aa6.62□□□□□ -1.35
CPNE4-213ENST00000515418 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
CPNE4-213ENST00000515418 F5H697 171 aa6.61□□□□□ -1.35
CPNE4-213ENST00000515418 SMIM17P0DL12 118 aa6.61□□□□□ -1.35
CPNE4-213ENST00000515418 ZNF415Q09FC8 603 aa6.61□□□□□ -1.35
CPNE4-213ENST00000515418 SYT8Q8NBV8 401 aa6.61□□□□□ -1.35
CPNE4-213ENST00000515418 G3V4G9 280 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 M0R2P5 195 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 HSBP1O75506 76 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 PPBPP02775 128 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 AMTP48728 403 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 NRACQ8N912 160 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 RNASE8Q8TDE3 154 aaKnown RBP6.6□□□□□ -1.35
CPNE4-213ENST00000515418 RASL10AQ92737 203 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 C1QTNF4Q9BXJ3 329 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
CPNE4-213ENST00000515418 Q6ZWC4 215 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 DEFB104AQ8WTQ1 72 aa6.6□□□□□ -1.35
CPNE4-213ENST00000515418 NOP10Q9NPE3 64 aaKnown RBP6.6□□□□□ -1.35
CPNE4-213ENST00000515418 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 EMP1P54849 157 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 PYY3Q5JQD4 70 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 SUMO4Q6EEV6 95 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 Q6ZTI0 123 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 FA2HQ7L5A8 372 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 MRAP2Q96G30 205 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 DNAH3Q8TD57 4116 aa6.59□□□□□ -1.35
CPNE4-213ENST00000515418 TRGV1A0A0A0MS02 117 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 IGHV1-24A0A0C4DH33 117 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 PLAC8L1A1L4L8 177 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 ZNF56Q15929 161 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 Q6ZSN1 163 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 LINC00173Q6ZV60 143 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 LINC00518Q8N0U6 118 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 TMEM263Q8WUH6 116 aaKnown RBP6.58□□□□□ -1.36
CPNE4-213ENST00000515418 SPXQ9BT56 116 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 Q9UF83 564 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 DEFB135Q30KP9 77 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 CFAP126Q5VTH2 177 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 CHCHD1Q96BP2 118 aaKnown RBP6.58□□□□□ -1.36
CPNE4-213ENST00000515418 AP5S1Q9NUS5 200 aa6.58□□□□□ -1.36
CPNE4-213ENST00000515418 TCAPO15273 167 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 P0DMU3 169 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 FAM231AP0DMU4 169 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 FAM231CP0DMU5 169 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 NEGR1Q7Z3B1 354 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 IL17DQ8TAD2 202 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 C12orf57Q99622 126 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 M0QY20 66 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 IGHV3-53P01767 116 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 PRB2P02812 416 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-213ENST00000515418 KRTDAPP60985 99 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 EGFEM1PQ0D2K5 195 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 UFSP1Q6NVU6 142 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 X6R8D5 127 aa6.57□□□□□ -1.36
CPNE4-213ENST00000515418 A0A096LNJ9 63 aa6.56□□□□□ -1.36
CPNE4-213ENST00000515418 A8MWV9 139 aa6.56□□□□□ -1.36
CPNE4-213ENST00000515418 DEFB4AO15263 64 aa6.56□□□□□ -1.36
CPNE4-213ENST00000515418 SUMO2P61956 95 aaKnown RBP6.56□□□□□ -1.36
CPNE4-213ENST00000515418 Q8N8P6 123 aa6.56□□□□□ -1.36
CPNE4-213ENST00000515418 PTH2Q96A98 100 aa6.56□□□□□ -1.36
CPNE4-213ENST00000515418 C16orf74Q96GX8 76 aa6.56□□□□□ -1.36
CPNE4-213ENST00000515418 TENM3Q9P273 2699 aa6.56□□□□□ -1.36
CPNE4-213ENST00000515418 KIR2DL5BA0A0G2JN68 375 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 KIR2DL5BA0A0G2JPC4 375 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 GAGE12BA1L429 117 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 RS1O15537 224 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 GAGE7O76087 117 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 SCGB1D1O95968 90 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 GAGE12FP0CL80 117 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 GAGE12GP0CL81 117 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 GAGE12IP0CL82 117 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 APOC4P55056 127 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 DAZ2Q13117 558 aaKnown RBP6.55□□□□□ -1.36
CPNE4-213ENST00000515418 KIR2DL5AQ8N109 375 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 KIR2DL5BQ8NHK3 375 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 ZNF479Q96JC4 524 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms