RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 NPSP0C0P6 89 aa6.06□□□□□ -1.44
CPNE4-211ENST00000514439 PLA2G2AP14555 144 aa6.06□□□□□ -1.44
CPNE4-211ENST00000514439 SUMO4Q6EEV6 95 aa6.06□□□□□ -1.44
CPNE4-211ENST00000514439 NEGR1Q7Z3B1 354 aa6.06□□□□□ -1.44
CPNE4-211ENST00000514439 MRPL35Q9NZE8 188 aaKnown RBP6.06□□□□□ -1.44
CPNE4-211ENST00000514439 COX11Q9Y6N1 276 aa6.06□□□□□ -1.44
CPNE4-211ENST00000514439 A0A087WX48 190 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 RBMY1A1P0DJD3 496 aaKnown RBP6.05□□□□□ -1.44
CPNE4-211ENST00000514439 RBMY1CP0DJD4 496 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 HLA-DRB4P13762 266 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 RBMY1FQ15415 496 aaKnown RBP6.05□□□□□ -1.44
CPNE4-211ENST00000514439 FAM74A4Q5TZK3 123 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 SYT8Q8NBV8 401 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 ESM1Q9NQ30 184 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 HLA-DRB4X5D2U9 266 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 IGKV2D-26A0A0A0MRZ7 120 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 TRAV2A0A0B4J234 112 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 F5H697 171 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 J3QKU1 62 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 RPL32P62910 135 aaKnown RBP6.05□□□□□ -1.44
CPNE4-211ENST00000514439 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 ZNF124Q15973 351 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 ZC2HC1BQ5TFG8 222 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 C2orf66Q6UXQ4 117 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 DYNLRB2Q8TF09 96 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 ORAOV1Q8WV07 137 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 TMEM160Q9NX00 188 aa6.05□□□□□ -1.44
CPNE4-211ENST00000514439 AKAP9Q99996 3911 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 RBMY1BA6NDE4 496 aaKnown RBP6.04□□□□□ -1.44
CPNE4-211ENST00000514439 RBMY1EA6NEQ0 496 aaKnown RBP6.04□□□□□ -1.44
CPNE4-211ENST00000514439 A8MTW9 85 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 H3BMM0 161 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 RBMY1DP0C7P1 496 aaKnown RBP6.04□□□□□ -1.44
CPNE4-211ENST00000514439 GTSCR1Q86UQ5 136 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 TRGV11A0A075B6L2 103 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 TAX1BP3O14907 124 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 SIVA1O15304 175 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 CRYGDP07320 174 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 POLR2KP53803 58 aaKnown RBP6.04□□□□□ -1.44
CPNE4-211ENST00000514439 TMEM97Q5BJF2 176 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 C11orf44Q8N8P7 122 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 TTTY13Q9BZ97 58 aa6.04□□□□□ -1.44
CPNE4-211ENST00000514439 SDHAF1A6NFY7 115 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 CBY3A6NI87 242 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 F8VRH5 84 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 ZNF56Q15929 161 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 DEFB114Q30KQ6 69 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 ZNF876PQ49A33 203 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 NEXN-AS1Q8NBZ9 246 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 RAX2Q96IS3 184 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 MAP6D1Q9H9H5 199 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 A0A1W2PRX2 142 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 H7C1H1 209 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 HTN1P15515 57 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 PLNP26678 52 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 CD300EQ496F6 205 aaPredicted RBP6.03□□□□□ -1.44
CPNE4-211ENST00000514439 DEFB104AQ8WTQ1 72 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 BAALCQ8WXS3 180 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 YAE1D1Q9NRH1 226 aa6.03□□□□□ -1.44
CPNE4-211ENST00000514439 PDZD2O15018 2839 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 TRBV6-5A0A0K0K1A5 114 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 M0QY20 66 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 VCYO14598 125 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 CD28P10747 220 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 HSD52Q0P140 79 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 MORN3Q6PF18 240 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-211ENST00000514439 ZFP2Q6ZN57 461 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 ERASQ7Z444 233 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 KIR2DL4Q99706 377 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 CHTOPQ9Y3Y2 248 aaKnown RBP6.02□□□□□ -1.45
CPNE4-211ENST00000514439 TRBV27A0A0K0K1C4 114 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 SEC11AP67812 179 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 FHL3Q13643 280 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 SPAG8Q99932 426 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-211ENST00000514439 TP53TG1Q9Y2A0 90 aa6.02□□□□□ -1.45
CPNE4-211ENST00000514439 ZNF256Q9Y2P7 627 aaPredicted RBP6.02□□□□□ -1.45
CPNE4-211ENST00000514439 ACANP16112 2415 aa6.01□□□□□ -1.45
CPNE4-211ENST00000514439 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
CPNE4-211ENST00000514439 HELZ2Q9BYK8 2649 aaKnown RBP6.01□□□□□ -1.45
CPNE4-211ENST00000514439 PRSS29PA6NIE9 313 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 CCL24O00175 119 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 PRM2P04554 102 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 RPL39P62891 51 aaKnown RBP6□□□□□ -1.45
CPNE4-211ENST00000514439 TRPT1Q86TN4 253 aaKnown RBP6□□□□□ -1.45
CPNE4-211ENST00000514439 CUBNO60494 3623 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 TRBV25-1A0A075B6N4 114 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 CCL25O15444 150 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 TSHBP01222 138 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 RNASE1P07998 156 aaKnown RBP6□□□□□ -1.45
CPNE4-211ENST00000514439 ODF3L2Q3SX64 289 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 LINC01006Q8NI28 216 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 CITED2Q99967 270 aaPredicted RBP6□□□□□ -1.45
CPNE4-211ENST00000514439 HIGD1BQ9P298 99 aa6□□□□□ -1.45
CPNE4-211ENST00000514439 NF1P21359 2839 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 TRAV8-6A0A0B4J262 113 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 LINC01549A6NIU2 74 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 IGIPA6NJ69 53 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms