RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 RNASE10Q5GAN6 216 aaKnown RBP4.22□□□□□ -1.73
CLDND1-229ENST00000513988 PIK3CD-AS1Q5SR53 167 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 C12orf45Q8N5I9 185 aaPredicted RBP4.22□□□□□ -1.73
CLDND1-229ENST00000513988 C20orf203Q8NBC4 194 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 KIR2DL4Q99706 377 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 NPVFQ9HCQ7 196 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 NDUFB11Q9NX14 153 aa4.22□□□□□ -1.73
CLDND1-229ENST00000513988 TRBV25-1A0A075B6N4 114 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 A0A0B4J2A0 478 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 ZNF861PO60384 105 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 CIB2O75838 187 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 PYYP10082 97 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 RNASE3P12724 160 aaKnown RBP4.21□□□□□ -1.74
CLDND1-229ENST00000513988 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 TMEM97Q5BJF2 176 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 ZFP1Q6P2D0 407 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 NTM-AS1Q6ZSK4 140 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 LYZL2Q7Z4W2 148 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 DIRAS2Q96HU8 199 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 SCN3BQ9NY72 215 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 TMEM14CQ9P0S9 112 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 RABL2AQ9UBK7 228 aaPredicted RBP4.21□□□□□ -1.74
CLDND1-229ENST00000513988 SHPKQ9UHJ6 478 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 RABL2BQ9UNT1 228 aa4.21□□□□□ -1.74
CLDND1-229ENST00000513988 F5H697 171 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 SYNGR2O43760 224 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 BCL2P10415 239 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 UBE2BP63146 152 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 RPL18AQ02543 176 aaKnown RBP4.2□□□□□ -1.74
CLDND1-229ENST00000513988 MXD1Q05195 221 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 ZFP69Q49AA0 526 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 SCGB2B2Q4G0G5 96 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 CT83Q5H943 113 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 Q6ZRG5 221 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 OR1L4Q8NGR5 311 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 RTBDNQ9BSG5 229 aaPredicted RBP4.2□□□□□ -1.74
CLDND1-229ENST00000513988 WFDC1Q9HC57 220 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 MGAT4CQ9UBM8 478 aa4.2□□□□□ -1.74
CLDND1-229ENST00000513988 IGLV4-60A0A075B6I1 120 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 OR10G8Q8NGN5 311 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 MITD1Q8WV92 249 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 TMED6Q8WW62 240 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 PFDN5Q99471 154 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 BCL7BQ9BQE9 202 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 TXNL4BQ9NX01 149 aaKnown RBP4.19□□□□□ -1.74
CLDND1-229ENST00000513988 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 CCDC59Q9P031 241 aaKnown RBP4.19□□□□□ -1.74
CLDND1-229ENST00000513988 KCNIP3Q9Y2W7 256 aa4.19□□□□□ -1.74
CLDND1-229ENST00000513988 IGKV3OR2-268A0A0C4DH90 116 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 FNDC10F2Z333 226 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 TNFRSF6BO95407 300 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 S100A4P26447 101 aaKnown RBP4.18□□□□□ -1.74
CLDND1-229ENST00000513988 SDC2P34741 201 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 GNGT1P63211 74 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 PCOTHQ58A44 107 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 UBE2NLQ5JXB2 153 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 DAND5Q8N907 189 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 TVP23CQ96ET8 276 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 AQP10Q96PS8 301 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 DERL1Q9BUN8 251 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 TREM1Q9NP99 234 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 UBE2D4Q9Y2X8 147 aa4.18□□□□□ -1.74
CLDND1-229ENST00000513988 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 A0A1B0GUV1 79 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 DUXBA0A1W2PPF3 345 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 B5MCH6 92 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 APOMO95445 188 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 CD3DP04234 171 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 NBEAP1P0C6P0 100 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 SNX29P2Q8IUI4 249 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 NEXN-AS1Q8NBZ9 246 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 DYNC2LI1Q8TCX1 351 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 CHCHD10Q8WYQ3 142 aaPredicted RBP4.17□□□□□ -1.74
CLDND1-229ENST00000513988 ISOC2Q96AB3 205 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 MGST2Q99735 147 aa4.17□□□□□ -1.74
CLDND1-229ENST00000513988 IGKV2D-26A0A0A0MRZ7 120 aa4.16□□□□□ -1.74
CLDND1-229ENST00000513988 IGHV1-24A0A0C4DH33 117 aa4.16□□□□□ -1.74
CLDND1-229ENST00000513988 IGHV1-58A0A0C4DH39 117 aa4.16□□□□□ -1.74
CLDND1-229ENST00000513988 TRBV6-1A0A0K0K1D8 114 aa4.16□□□□□ -1.74
CLDND1-229ENST00000513988 CAMPP49913 170 aa4.16□□□□□ -1.74
CLDND1-229ENST00000513988 IQCJQ1A5X6 159 aa4.16□□□□□ -1.74
CLDND1-229ENST00000513988 MIC13Q5XKP0 118 aa4.16□□□□□ -1.74
CLDND1-229ENST00000513988 FAM19A5Q7Z5A7 132 aaPredicted RBP4.16□□□□□ -1.74
CLDND1-229ENST00000513988 SLIRPQ9GZT3 109 aaKnown RBP4.16□□□□□ -1.74
CLDND1-229ENST00000513988 FAM168BA1KXE4 195 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.15□□□□□ -1.75
CLDND1-229ENST00000513988 CAMLGP49069 296 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 TAS2R19P59542 299 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 MEF2BQ02080 365 aaPredicted RBP4.15□□□□□ -1.75
CLDND1-229ENST00000513988 SAMD12Q8N8I0 201 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 PHYHIPLQ96FC7 376 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 SDHCQ99643 169 aaPredicted RBP4.15□□□□□ -1.75
CLDND1-229ENST00000513988 NMES1Q9C002 83 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 PSENENQ9NZ42 101 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 TPRKBQ9Y3C4 175 aa4.15□□□□□ -1.75
CLDND1-229ENST00000513988 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms