RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 FLG2Q5D862 2391 aaPredicted RBP4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 FAT1Q14517 4588 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 GGTLC3B5MD39 225 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 SIVA1O15304 175 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 CSN1S1P47710 185 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 FHITP49789 147 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 DEFA1P59665 94 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 DEFA3P59666 94 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 ZNF726P1Q15940 193 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 DPPA3Q6W0C5 159 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 LYPD1Q8N2G4 141 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 OR10G4Q8NGN3 311 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 OR10G9Q8NGN4 311 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 PRO0255Q9UI72 69 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 HHLA3Q9XRX5 114 aa4.28□□□□□ -1.72
HMGN1P17-201ENST00000513734 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 TRBV7-9A0A0J9YWB2 115 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 RNF222A6NCQ9 220 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 G3V3Q6 166 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 PET100P0DJ07 73 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 ATP6V0CP27449 155 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 GCHFRP30047 84 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 CDC34P49427 236 aaPredicted RBP4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 TAS2R45P59539 299 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 HERV-K104P63124 156 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 HAMPP81172 84 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 ACOT6Q3I5F7 207 aaPredicted RBP4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 TDRG1Q3Y452 100 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 RASL10AQ92737 203 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 TREM1Q9NP99 234 aa4.27□□□□□ -1.73
HMGN1P17-201ENST00000513734 IGHV3-73A0A0B4J1V6 119 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 TRAV4A0A0B4J268 109 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 IGHV3-38A0A0C4DH36 116 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 A0A1W2PPV4 95 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 M0R2P5 195 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 STAG3L2P0CL84 134 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 STAG3L3P0CL85 134 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 RPL7L1Q6DKI1 246 aaKnown RBP4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 FAM159AQ6UWV7 190 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 NEGR1Q7Z3B1 354 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 Q8NBF4 154 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 OR2G3Q8NGZ4 309 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 CMTM2Q8TAZ6 248 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 AQP10Q96PS8 301 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 Q9UF83 564 aa4.26□□□□□ -1.73
HMGN1P17-201ENST00000513734 C9JCJ5 164 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 SMLR1H3BR10 107 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 H7C423 109 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 TCRAP04437 139 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 GATA1P15976 413 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 SRIP30626 198 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 FGF8P55075 233 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 UBE2G2P60604 165 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 MRPL23Q16540 153 aaKnown RBP4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 PRNTQ86SH4 94 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 IQCF2Q8IXL9 164 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 OR4C5Q8NGB2 326 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 SUN5Q8TC36 379 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 C9orf85Q96MD7 179 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 MED28Q9H204 178 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 PARLQ9H300 379 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 JPT2Q9H910 190 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 PSG8Q9UQ74 426 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 LENEPQ9Y5L5 61 aa4.25□□□□□ -1.73
HMGN1P17-201ENST00000513734 HERC1Q15751 4861 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 A0A087WTM6 91 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 FXYD6-FXYD2A0A087WZ82 144 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 TRAV21A0A0B4J279 112 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 PTTG1O95997 202 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 GCGP01275 180 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 RNASE3P12724 160 aaKnown RBP4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 ZNF506Q5JVG8 444 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 CFAP126Q5VTH2 177 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 SLC25A29Q8N8R3 303 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 C5orf17Q8NAS9 161 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 ASB13Q8WXK3 278 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 PSMG3Q9BT73 122 aaPredicted RBP4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 LY96Q9Y6Y9 160 aa4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
HMGN1P17-201ENST00000513734 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 IGKV3D-20A0A0C4DH25 116 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 FBLL1A6NHQ2 334 aaKnown RBP4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 RS1O15537 224 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 IGHV3-30P01768 117 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 IGHV3-33P01772 117 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 CRYGDP07320 174 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 PFN1P07737 140 aaKnown RBP4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 GIPP09681 153 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 IGHV3-30-3P0DP02 117 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 IGHV3-30-5P0DP03 117 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 SSTP61278 116 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 FLI1Q01543 452 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 RIGQ13278 110 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 WFDC2Q14508 124 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 FAM74A1Q5RGS3 127 aa4.23□□□□□ -1.73
HMGN1P17-201ENST00000513734 Q86TA4 180 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms