RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 C9orf116Q5BN46 136 aaPredicted RBP6.84□□□□□ -1.31
SFXN1-210ENST00000513725 C20orf203Q8NBC4 194 aa6.84□□□□□ -1.31
SFXN1-210ENST00000513725 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
SFXN1-210ENST00000513725 MITD1Q8WV92 249 aa6.84□□□□□ -1.31
SFXN1-210ENST00000513725 NMES1Q9C002 83 aa6.84□□□□□ -1.31
SFXN1-210ENST00000513725 TRBV25-1A0A075B6N4 114 aa6.83□□□□□ -1.32
SFXN1-210ENST00000513725 TSC22D2O75157 780 aa6.83□□□□□ -1.32
SFXN1-210ENST00000513725 TVP23CQ96ET8 276 aa6.83□□□□□ -1.32
SFXN1-210ENST00000513725 BCL7BQ9BQE9 202 aa6.83□□□□□ -1.32
SFXN1-210ENST00000513725 ARL16Q0P5N6 197 aa6.82□□□□□ -1.32
SFXN1-210ENST00000513725 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
SFXN1-210ENST00000513725 NTM-AS1Q6ZSK4 140 aa6.82□□□□□ -1.32
SFXN1-210ENST00000513725 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
SFXN1-210ENST00000513725 FXYD5Q96DB9 178 aa6.82□□□□□ -1.32
SFXN1-210ENST00000513725 OR5AC2Q9NZP5 309 aa6.82□□□□□ -1.32
SFXN1-210ENST00000513725 LOC107984640A0A0U1RRK4 108 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 FAM25AB3EWG3 89 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 FAM25CB3EWG5 89 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 FAM25GB3EWG6 89 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 HPGDSO60760 199 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 AKAIN1P0CW23 69 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 SULT1A2P50226 295 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 SSBP1Q04837 148 aaKnown RBP6.81□□□□□ -1.32
SFXN1-210ENST00000513725 CLVS1Q8IUQ0 354 aaPredicted RBP6.81□□□□□ -1.32
SFXN1-210ENST00000513725 C15orf40Q8WUR7 153 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 FAM167A-AS1Q96KT0 104 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 HYLS1Q96M11 299 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 NDFIP1Q9BT67 221 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 DERL1Q9BUN8 251 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 LYRM2Q9NU23 88 aaPredicted RBP6.81□□□□□ -1.32
SFXN1-210ENST00000513725 SCP2D1Q9UJQ7 156 aa6.81□□□□□ -1.32
SFXN1-210ENST00000513725 TGFBR1P36897 503 aa6.8□□□□□ -1.32
SFXN1-210ENST00000513725 EIF5AL1Q6IS14 154 aaKnown RBP6.8□□□□□ -1.32
SFXN1-210ENST00000513725 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
SFXN1-210ENST00000513725 CMTM2Q8TAZ6 248 aa6.8□□□□□ -1.32
SFXN1-210ENST00000513725 A0A1B0GUV1 79 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 FGF6P10767 208 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 ZNF80P51504 273 aaPredicted RBP6.79□□□□□ -1.32
SFXN1-210ENST00000513725 TAS2R30P59541 319 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 GABARAPL2P60520 117 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 MIR17HGQ75NE6 70 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 SFRP2Q96HF1 295 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 AQP10Q96PS8 301 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 WDR83OSQ9Y284 106 aa6.79□□□□□ -1.32
SFXN1-210ENST00000513725 IGLV4-60A0A075B6I1 120 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 A0A087X002 238 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 GCGP01275 180 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 AQP4P55087 323 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 TMEM128Q5BJH2 165 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 GOLT1AQ6ZVE7 132 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 OR11H4Q8NGC9 324 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
SFXN1-210ENST00000513725 IL36BQ9NZH7 164 aa6.78□□□□□ -1.32
SFXN1-210ENST00000513725 TRBV6-1A0A0K0K1D8 114 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 TSHBP01222 138 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 BAXQ07812 192 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 IQCJQ1A5X6 159 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 GCSAMLQ5JQS6 135 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 FAM74A1Q5RGS3 127 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 LINC00526Q96FQ7 95 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 UQCC1Q9NVA1 299 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 EXTL2Q9UBQ6 330 aa6.77□□□□□ -1.33
SFXN1-210ENST00000513725 OR7C2O60412 319 aa6.76□□□□□ -1.33
SFXN1-210ENST00000513725 ZFP69Q49AA0 526 aa6.76□□□□□ -1.33
SFXN1-210ENST00000513725 KRTAP11-1Q8IUC1 163 aa6.76□□□□□ -1.33
SFXN1-210ENST00000513725 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
SFXN1-210ENST00000513725 H3BVH4 76 aa6.75□□□□□ -1.33
SFXN1-210ENST00000513725 RAB4BP61018 213 aa6.75□□□□□ -1.33
SFXN1-210ENST00000513725 SPANXN2Q5MJ10 180 aa6.75□□□□□ -1.33
SFXN1-210ENST00000513725 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
SFXN1-210ENST00000513725 CNBD2Q96M20 576 aa6.75□□□□□ -1.33
SFXN1-210ENST00000513725 OTORQ9NRC9 128 aa6.75□□□□□ -1.33
SFXN1-210ENST00000513725 IGKV3D-20A0A0C4DH25 116 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 IGKV3OR2-268A0A0C4DH90 116 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 UBE2L5PA0A1B0GUS4 154 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 SCGB1D2O95969 90 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 UBE2L3P68036 154 aaKnown RBP6.74□□□□□ -1.33
SFXN1-210ENST00000513725 CTAG1AP78358 180 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 CTF1Q16619 201 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 SMUG1Q53HV7 270 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 CHCHD10Q8WYQ3 142 aaPredicted RBP6.74□□□□□ -1.33
SFXN1-210ENST00000513725 MCUBQ9NWR8 336 aa6.74□□□□□ -1.33
SFXN1-210ENST00000513725 IGHV1-58A0A0C4DH39 117 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 MBPP02686 304 aaPredicted RBP6.73□□□□□ -1.33
SFXN1-210ENST00000513725 BCL2P10415 239 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 LSM3P62310 102 aaKnown RBP6.73□□□□□ -1.33
SFXN1-210ENST00000513725 MRPS10P82664 201 aaKnown RBP6.73□□□□□ -1.33
SFXN1-210ENST00000513725 ZNF56Q15929 161 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 MZT2AQ6P582 158 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 ISOC2Q96AB3 205 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 SGK494Q96LW2 274 aa6.73□□□□□ -1.33
SFXN1-210ENST00000513725 M0R381 172 aa6.72□□□□□ -1.33
SFXN1-210ENST00000513725 ZNF861PO60384 105 aa6.72□□□□□ -1.33
SFXN1-210ENST00000513725 SFT2D2O95562 160 aa6.72□□□□□ -1.33
SFXN1-210ENST00000513725 ARMS2P0C7Q2 107 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms