RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TMEM78Q5T7P6 136 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 PATE2Q6UY27 113 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 LINC00305Q7Z4B0 112 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 ZNF546Q86UE3 836 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 SAMD12Q8N8I0 201 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 CYB561D1Q8N8Q1 229 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 Q8TAT8 98 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 MITD1Q8WV92 249 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 UBE2WQ96B02 151 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 ARL6Q9H0F7 186 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 VCXQ9H320 206 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 NAA60Q9H7X0 242 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 ZNF492Q9P255 531 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 KLK12Q9UKR0 248 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 MUC17Q685J3 4493 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 IGHV3-64A0A075B6Q5 118 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 A0A087WX48 190 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 H3BQ15 152 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 H7C1H1 209 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 SLC17A3O00476 420 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 SNRPCP09234 159 aaKnown RBP2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 SLC25A6P12236 298 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 INPP1P49441 399 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 FGF8P55075 233 aaPredicted RBP2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 UBE2MP61081 183 aaKnown RBP2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 PRR3P79522 188 aaKnown RBP2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 AKR1C1Q04828 323 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 MXD1Q05195 221 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 PDE6HQ13956 83 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 SMUG1Q53HV7 270 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 KCNIP4Q6PIL6 250 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 Q6ZRG5 221 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 STX12Q86Y82 276 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 C12orf45Q8N5I9 185 aaPredicted RBP2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 ZFAND2AQ8N6M9 145 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 OR13C8Q8NGS7 320 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 C15orf40Q8WUR7 153 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 GTSF1Q8WW33 167 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 PTH2Q96A98 100 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 ATP5SQ99766 215 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 RTBDNQ9BSG5 229 aaPredicted RBP2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 TREM1Q9NP99 234 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 C14orf166Q9Y224 244 aaKnown RBP2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 LENEPQ9Y5L5 61 aa2.23□□□□□ -2.05
PDLIM5-218ENST00000513341 IGHV3-16A0A0C4DH30 117 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 FAM240BA0A1B0GVZ2 78 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 DUXBA0A1W2PPF3 345 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 K7EQM0 130 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 GOSR2O14653 212 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 SYNGR2O43760 224 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 IFNA7P01567 189 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 CD3DP04234 171 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 GZMBP10144 247 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 ANXA3P12429 323 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 ZNF138P52744 262 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 VBP1P61758 197 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 ERCC8Q13216 396 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 ZNF266Q14584 549 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 PRR4Q16378 134 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 MIAQ16674 131 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 TMEM183BQ1AE95 376 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 ZNF506Q5JVG8 444 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 SPANXN2Q5MJ10 180 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 CFAP126Q5VTH2 177 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 C10orf113Q5VZT2 155 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 Q6AWC8 147 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 ZFP2Q6ZN57 461 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 LYZL2Q7Z4W2 148 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 TMEM183AQ8IXX5 376 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 TMEM75Q8N9X5 138 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 KCNS1Q96KK3 526 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 SCGB3A2Q96PL1 93 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 MTFP1Q9UDX5 166 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 PRO0461Q9UI25 63 aa2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 PAIP2BQ9ULR5 123 aaKnown RBP2.22□□□□□ -2.05
PDLIM5-218ENST00000513341 TRBV19A0A075B6N1 114 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 RBAKDNA6NC62 111 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 M0R3E3 92 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 BCL2L11O43521 198 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 RAB3DO95716 219 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 CRPP02741 224 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 TCRBP04435 133 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 LINC00694P0DN24 101 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 TAS2R19P59542 299 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 PKIAP61925 76 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 SSBP1Q04837 148 aaKnown RBP2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 SPCS2Q15005 226 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 SCGB2B2Q4G0G5 96 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 PRR9Q5T870 116 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 ENHOQ6UWT2 76 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 Q6ZQT7 251 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 TMEM229BQ8NBD8 167 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 OR1L4Q8NGR5 311 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 ENKURQ8TC29 256 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 DNAJC30Q96LL9 226 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 PFDN5Q99471 154 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 GGACTQ9BVM4 153 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 TMEM14CQ9P0S9 112 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms