RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 DAD1P61803 113 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 K7EMI3 77 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 Q8N1Y9 231 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 CENPEQ02224 2701 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 A0A0J9YX75 114 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 RNF152Q8N8N0 203 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 TRAV25A0A0B4J276 109 aa9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 TRBV7-9A0A0J9YWB2 115 aa9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 DLX4Q92988 240 aaPredicted RBP9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 TRBV25-1A0A075B6N4 114 aa9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 F5H768 121 aa9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 EREGO14944 169 aa9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 NOP10Q9NPE3 64 aaKnown RBP9.98□□□□□ -0.81
PCDHA4-202ENST00000512229 HLA-DRB4P13762 266 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 MYCNOSP40205 109 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 SAMD5Q5TGI4 173 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 RPL39LQ96EH5 51 aaKnown RBP9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 SNHG12Q9BXW3 62 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 DKK2Q9UBU2 259 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 HLA-DRB4X5D2U9 266 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 LINC00158P58513 81 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 MBD6Q96DN6 1003 aa9.97□□□□□ -0.81
PCDHA4-202ENST00000512229 COX8AP10176 69 aa9.96□□□□□ -0.81
PCDHA4-202ENST00000512229 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.81
PCDHA4-202ENST00000512229 A0A1B0GXF2 115 aa9.96□□□□□ -0.81
PCDHA4-202ENST00000512229 AVPP01185 164 aa9.96□□□□□ -0.81
PCDHA4-202ENST00000512229 TMEM243Q9BU79 118 aa9.96□□□□□ -0.81
PCDHA4-202ENST00000512229 CKS1BP61024 79 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 C10orf99Q6UWK7 81 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 PRIMA1Q86XR5 153 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 ANKRD17O75179 2603 aaKnown RBP9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 CD5LO43866 347 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 C9orf66Q5T8R8 295 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 ADAMTSL5Q6ZMM2 481 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 LINC00173Q6ZV60 143 aa9.96□□□□□ -0.82
PCDHA4-202ENST00000512229 MAP1AP78559 2803 aaPredicted RBP9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 SPTBN5Q9NRC6 3674 aaKnown RBP9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 RNASE1P07998 156 aaKnown RBP9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 KIR3DS1Q14943 382 aa9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 PRSS29PA6NIE9 313 aa9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 MED14OSP0DP75 135 aa9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 SMAD5-AS1Q9Y6J3 95 aa9.95□□□□□ -0.82
PCDHA4-202ENST00000512229 RHOHQ15669 191 aa9.94□□□□□ -0.82
PCDHA4-202ENST00000512229 K7EQG2 157 aa9.94□□□□□ -0.82
PCDHA4-202ENST00000512229 Q6ZS46 218 aa9.94□□□□□ -0.82
PCDHA4-202ENST00000512229 FLNBO75369 2602 aaKnown RBP9.94□□□□□ -0.82
PCDHA4-202ENST00000512229 LGALS9O00182 355 aa9.94□□□□□ -0.82
PCDHA4-202ENST00000512229 SS18Q15532 418 aa9.94□□□□□ -0.82
PCDHA4-202ENST00000512229 Q6ZSV7 163 aa9.94□□□□□ -0.82
PCDHA4-202ENST00000512229 NPC2P61916 151 aa9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 DLEU1O43261 78 aa9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 PSMB8P28062 276 aa9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 KRTAP10-9P60411 292 aa9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 RBMY1BA6NDE4 496 aaKnown RBP9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 RBMY1EA6NEQ0 496 aaKnown RBP9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 RBMY1DP0C7P1 496 aaKnown RBP9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 RBMY1A1P0DJD3 496 aaKnown RBP9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 RBMY1CP0DJD4 496 aa9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 MDFICQ9P1T7 246 aa9.93□□□□□ -0.82
PCDHA4-202ENST00000512229 PCSK5Q92824 1860 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 TDRG1Q3Y452 100 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 DSCAML1Q8TD84 2053 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 CRIP1P50238 77 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 GAGE6Q13070 117 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 GDF5OSQ5U4N7 250 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 C11orf68Q9H3H3 251 aaKnown RBP9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 IGLC6P0CF74 106 aa9.92□□□□□ -0.82
PCDHA4-202ENST00000512229 PTPRBP23467 1997 aa9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 PSMG3-AS1Q96PY0 264 aa9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 RAI1Q7Z5J4 1906 aaPredicted RBP9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 KIR2DL5BA0A0G2JN68 375 aa9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 KIR2DL5BA0A0G2JPC4 375 aa9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 KIR2DL5AQ8N109 375 aa9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 USP34Q70CQ2 3546 aa9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 LINC01545Q5VT33 79 aa9.91□□□□□ -0.82
PCDHA4-202ENST00000512229 VWC2LB2RUY7 222 aa9.9□□□□□ -0.82
PCDHA4-202ENST00000512229 PAX4O43316 350 aa9.9□□□□□ -0.82
PCDHA4-202ENST00000512229 IGLV2-11P01706 119 aa9.9□□□□□ -0.82
PCDHA4-202ENST00000512229 C20orf173Q96LM9 149 aa9.9□□□□□ -0.82
PCDHA4-202ENST00000512229 MAP6D1Q9H9H5 199 aa9.9□□□□□ -0.82
PCDHA4-202ENST00000512229 ZFP2Q6ZN57 461 aa9.9□□□□□ -0.82
PCDHA4-202ENST00000512229 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 IGLV1-40P01703 118 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 DEFB114Q30KQ6 69 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 JPT2Q9H910 190 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms