RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 EIF2B2P49770 351 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 GZMMP51124 257 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 CAV1Q03135 178 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 CDK10Q15131 360 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 KRTAP19-2Q3LHN2 52 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 VMA21Q3ZAQ7 101 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 CCDC153Q494R4 210 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 RPL39P5Q59GN2 51 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 LINC01556Q5JQF7 62 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 SMIM15Q7Z3B0 74 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 AMN1Q8IY45 258 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 STX19Q8N4C7 294 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 C3orf22Q8N5N4 141 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 OR2D3Q8NGH3 330 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 MCFD2Q8NI22 146 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 NEK7Q8TDX7 302 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 CPNE2Q96FN4 548 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 DPH3Q96FX2 82 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 SFRP2Q96HF1 295 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 SIGMAR1Q99720 223 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 GINS3Q9BRX5 216 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 TMEM109Q9BVC6 243 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 TRAPPC2LQ9UL33 140 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 TRAPPC1Q9Y5R8 145 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 IGKV1-12A0A0C4DH73 117 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 LINC00862A6NCI5 91 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 ZNF98A6NK75 572 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 OR4C45A6NMZ5 311 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 CYB5BO43169 146 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 YPEL1O60688 119 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 OR7C1O76099 320 aaPredicted RBP1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 HRASP01112 189 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 KRASP01116 189 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 IGLV7-43P04211 117 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 RPSAP08865 295 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 S100A2P29034 98 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 AKR1C2P52895 323 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 FXYD6P3P58550 94 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 FABP9Q0Z7S8 132 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 DHRS2Q13268 280 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 IAH1Q2TAA2 248 aaPredicted RBP1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 KLK9Q2XQG4 91 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 C1orf194Q5T5A4 169 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 TRIQKQ629K1 86 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 LAIR2Q6ISS4 152 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 S100A7AQ86SG5 101 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 SLC35F6Q8N357 371 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 OR4X1Q8NH49 305 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 Q8TAT8 98 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 TMEM167AQ8TBQ9 72 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 DCANP1Q8TF63 244 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 IGF2BP2-AS1Q96M15 143 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 YPEL2Q96QA6 119 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 TBX5Q99593 518 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 ARMC1Q9NVT9 282 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 GID8Q9NWU2 228 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 TAS2R1Q9NYW7 299 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 AK3Q9UIJ7 227 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 KLK9Q9UKQ9 250 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 PRELID3BQ9Y3B1 194 aa1.78□□□□□ -2.12
TOPBP1-208ENST00000511439 A0A1B0GV72 72 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 M0R381 172 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 GSTZ1O43708 216 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 APOMO95445 188 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 SPI1P17947 270 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 UBE2D1P51668 147 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 LINC00313P59037 77 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 PSG9Q00887 426 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 C10orf55Q5SWW7 151 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 BCL2L15Q5TBC7 163 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 LPCAT3Q6P1A2 487 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 TBPL2Q6SJ96 375 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 IDO2Q6ZQW0 420 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 TMEM144Q7Z5S9 345 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 DHFR2Q86XF0 187 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 ZNF680Q8NEM1 530 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 OTOSQ8NHW6 89 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 LHFPL5Q8TAF8 219 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 TEX47Q8TBZ9 253 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 THEM6Q8WUY1 208 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 PP6455Q8WZ26 134 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 OR52B2Q96RD2 323 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 SLC35B3Q9H1N7 401 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 NOP10Q9NPE3 64 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 ANAPC10Q9UM13 185 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 FAM32AQ9Y421 112 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 PXMP4Q9Y6I8 212 aa1.77□□□□□ -2.13
TOPBP1-208ENST00000511439 PDE6DO43924 150 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 IFNA1P01562 189 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 PRM2P04554 102 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 RNASE2P10153 161 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 FGF6P10767 208 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 GPX2P18283 190 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 SRIP30626 198 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 ETV6P41212 452 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 RPL27AP46776 148 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 TAS2R45P59539 299 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 FLI1Q01543 452 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 RTL8BQ17RB0 113 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms