RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 AP5S1Q9NUS5 200 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
SCLT1-209ENST00000511426 K7EMI3 77 aa11.03□□□□□ -0.64
SCLT1-209ENST00000511426 RHODO00212 210 aa11.03□□□□□ -0.64
SCLT1-209ENST00000511426 LINC00315P59091 139 aa11.03□□□□□ -0.64
SCLT1-209ENST00000511426 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
SCLT1-209ENST00000511426 FA2HQ7L5A8 372 aa11.03□□□□□ -0.64
SCLT1-209ENST00000511426 RASL10AQ92737 203 aa11.03□□□□□ -0.64
SCLT1-209ENST00000511426 LINC01546A6NGU7 62 aa11.02□□□□□ -0.64
SCLT1-209ENST00000511426 NUPR1O60356 82 aa11.02□□□□□ -0.64
SCLT1-209ENST00000511426 NPYP01303 97 aa11.02□□□□□ -0.64
SCLT1-209ENST00000511426 AMTP48728 403 aa11.02□□□□□ -0.64
SCLT1-209ENST00000511426 RRN3P1Q2M238 152 aa11.02□□□□□ -0.64
SCLT1-209ENST00000511426 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.64
SCLT1-209ENST00000511426 A8MZ25 164 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 CIDEAO60543 219 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
SCLT1-209ENST00000511426 NRACQ8N912 160 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 OR10D4PQ8NGN7 298 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 ATRQ13535 2644 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 H7C1H1 209 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 NCR2O95944 276 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 CRYGDP07320 174 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 MGPP08493 103 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 URB1-AS1Q96HZ7 61 aa11.01□□□□□ -0.65
SCLT1-209ENST00000511426 ZFP2Q6ZN57 461 aa11□□□□□ -0.65
SCLT1-209ENST00000511426 SMKR1H3BMG3 65 aa10.99□□□□□ -0.65
SCLT1-209ENST00000511426 SPRY2O43597 315 aa10.99□□□□□ -0.65
SCLT1-209ENST00000511426 Q8N8P6 123 aa10.99□□□□□ -0.65
SCLT1-209ENST00000511426 TRBV6-5A0A0K0K1A5 114 aa10.98□□□□□ -0.65
SCLT1-209ENST00000511426 AZU1P20160 251 aa10.98□□□□□ -0.65
SCLT1-209ENST00000511426 IFI27P40305 119 aaPredicted RBP10.98□□□□□ -0.65
SCLT1-209ENST00000511426 SUMO2P61956 95 aaKnown RBP10.98□□□□□ -0.65
SCLT1-209ENST00000511426 OVOL2Q9BRP0 275 aa10.98□□□□□ -0.65
SCLT1-209ENST00000511426 MUC4Q99102 2169 aa10.98□□□□□ -0.65
SCLT1-209ENST00000511426 A0A087WWL8 130 aa10.98□□□□□ -0.65
SCLT1-209ENST00000511426 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
SCLT1-209ENST00000511426 SUMO4Q6EEV6 95 aa10.98□□□□□ -0.65
SCLT1-209ENST00000511426 TRAV26-2A0A0B4J265 109 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 RS1O15537 224 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 ZNF56Q15929 161 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 FAM74A4Q5TZK3 123 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 UFSP1Q6NVU6 142 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 SMIM2Q9BVW6 85 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 JPT2Q9H910 190 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 TENM1Q9UKZ4 2725 aa10.97□□□□□ -0.65
SCLT1-209ENST00000511426 IGLV2-18A0A075B6J9 118 aa10.96□□□□□ -0.65
SCLT1-209ENST00000511426 LOC389332A0A1B0GUA5 103 aa10.96□□□□□ -0.65
SCLT1-209ENST00000511426 F5H697 171 aa10.96□□□□□ -0.65
SCLT1-209ENST00000511426 JOSD1Q15040 202 aaPredicted RBP10.96□□□□□ -0.65
SCLT1-209ENST00000511426 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.65
SCLT1-209ENST00000511426 Q6ZWC4 215 aa10.96□□□□□ -0.65
SCLT1-209ENST00000511426 LINC00518Q8N0U6 118 aa10.96□□□□□ -0.65
SCLT1-209ENST00000511426 HSPB8Q9UJY1 196 aa10.96□□□□□ -0.65
SCLT1-209ENST00000511426 MAST4O15021 2626 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 PLAC8L1A1L4L8 177 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 LINC01549A6NIU2 74 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 M0QY20 66 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 TCAPO15273 167 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 G0S2P27469 103 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 TRAV4A0A0B4J268 109 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 GAS8-AS1O95177 125 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 LEPROTL1O95214 131 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 HBDP02042 147 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
SCLT1-209ENST00000511426 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 C18orf15Q96N68 181 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 NIT2Q9NQR4 276 aa10.95□□□□□ -0.66
SCLT1-209ENST00000511426 MRPL16Q9NX20 251 aaKnown RBP10.95□□□□□ -0.66
SCLT1-209ENST00000511426 TRGV1A0A0A0MS02 117 aa10.94□□□□□ -0.66
SCLT1-209ENST00000511426 PRM2P04554 102 aa10.94□□□□□ -0.66
SCLT1-209ENST00000511426 ORMDL2Q53FV1 153 aa10.94□□□□□ -0.66
SCLT1-209ENST00000511426 PYY3Q5JQD4 70 aa10.94□□□□□ -0.66
SCLT1-209ENST00000511426 FBN1P35555 2871 aaKnown RBP10.93□□□□□ -0.66
SCLT1-209ENST00000511426 IGHV3-53P01767 116 aa10.93□□□□□ -0.66
SCLT1-209ENST00000511426 DNAJC30Q96LL9 226 aa10.93□□□□□ -0.66
SCLT1-209ENST00000511426 X6R8D5 127 aa10.93□□□□□ -0.66
SCLT1-209ENST00000511426 VCYO14598 125 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 POLR2KP53803 58 aaKnown RBP10.92□□□□□ -0.66
SCLT1-209ENST00000511426 KRTAP10-11P60412 298 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 LAGE3Q14657 143 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 TMEM70Q9BUB7 260 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 NOP10Q9NPE3 64 aaKnown RBP10.92□□□□□ -0.66
SCLT1-209ENST00000511426 TP53TG1Q9Y2A0 90 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 MIFP14174 115 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 FCER1GP30273 86 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 RPL39LQ96EH5 51 aaKnown RBP10.92□□□□□ -0.66
SCLT1-209ENST00000511426 C12orf57Q99622 126 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 KIR2DL4Q99706 377 aa10.92□□□□□ -0.66
SCLT1-209ENST00000511426 TRBV10-1A0A0K0K1A3 114 aa10.91□□□□□ -0.66
SCLT1-209ENST00000511426 LYRM9A8MSI8 78 aa10.91□□□□□ -0.66
SCLT1-209ENST00000511426 LINC00612Q8N6U2 182 aa10.91□□□□□ -0.66
SCLT1-209ENST00000511426 RNF183Q96D59 192 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms