RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 RHODO00212 210 aa10.23□□□□□ -0.77
TPM3-219ENST00000509409 LECT2O14960 151 aa10.23□□□□□ -0.77
TPM3-219ENST00000509409 TPT1P13693 172 aaKnown RBP10.23□□□□□ -0.77
TPM3-219ENST00000509409 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
TPM3-219ENST00000509409 A0A087WWL8 130 aa10.22□□□□□ -0.77
TPM3-219ENST00000509409 M0R381 172 aa10.22□□□□□ -0.77
TPM3-219ENST00000509409 ARPC5O15511 151 aa10.22□□□□□ -0.77
TPM3-219ENST00000509409 LINC00694P0DN24 101 aa10.22□□□□□ -0.77
TPM3-219ENST00000509409 DNLZQ5SXM8 178 aa10.22□□□□□ -0.77
TPM3-219ENST00000509409 FAM30AQ9NZY2 134 aa10.22□□□□□ -0.77
TPM3-219ENST00000509409 HERC1Q15751 4861 aa10.22□□□□□ -0.77
TPM3-219ENST00000509409 WFDC2Q14508 124 aa10.21□□□□□ -0.77
TPM3-219ENST00000509409 KCNIP4Q6PIL6 250 aa10.21□□□□□ -0.77
TPM3-219ENST00000509409 SFRP2Q96HF1 295 aa10.21□□□□□ -0.77
TPM3-219ENST00000509409 DNAH8Q96JB1 4490 aa10.21□□□□□ -0.78
TPM3-219ENST00000509409 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.2□□□□□ -0.78
TPM3-219ENST00000509409 SEC11BP0C7V7 166 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 AKR1C3P42330 323 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 FHITP49789 147 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 ZNF674Q2M3X9 581 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 RMI2Q96E14 147 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 CYTL1Q9NRR1 136 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 COX11Q9Y6N1 276 aa10.2□□□□□ -0.78
TPM3-219ENST00000509409 IGKV2D-24A0A075B6R9 120 aa10.19□□□□□ -0.78
TPM3-219ENST00000509409 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
TPM3-219ENST00000509409 ZFP82Q8N141 532 aa10.19□□□□□ -0.78
TPM3-219ENST00000509409 TCEAL7Q9BRU2 100 aa10.19□□□□□ -0.78
TPM3-219ENST00000509409 A0A087WX48 190 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 PAGE4O60829 102 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 LTAP01374 205 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 C1QBP02746 253 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 RPL36AP83881 106 aaKnown RBP10.18□□□□□ -0.78
TPM3-219ENST00000509409 RGS21Q2M5E4 152 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 NIT1Q86X76 327 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 RPL36ALQ969Q0 106 aaKnown RBP10.18□□□□□ -0.78
TPM3-219ENST00000509409 KLK12Q9UKR0 248 aa10.18□□□□□ -0.78
TPM3-219ENST00000509409 A0A1B0GV50 99 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 RBFOX3A6NFN3 312 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 TMEM262E9PQX1 116 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 G3V3Q6 166 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 SMLR1H3BR10 107 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 ELOBQ15370 118 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 SFT2D1Q8WV19 159 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
TPM3-219ENST00000509409 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
TPM3-219ENST00000509409 S100A9P06702 114 aaKnown RBP10.16□□□□□ -0.78
TPM3-219ENST00000509409 Q8N976 141 aa10.16□□□□□ -0.78
TPM3-219ENST00000509409 FAM213BQ8TBF2 198 aa10.16□□□□□ -0.78
TPM3-219ENST00000509409 TRBV7-3A0A075B6L6 115 aa10.15□□□□□ -0.78
TPM3-219ENST00000509409 PFDN1O60925 122 aa10.15□□□□□ -0.78
TPM3-219ENST00000509409 DNAJC30Q96LL9 226 aa10.15□□□□□ -0.78
TPM3-219ENST00000509409 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
TPM3-219ENST00000509409 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
TPM3-219ENST00000509409 UBE2D3P61077 147 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 SSTP61278 116 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 UBE2D2P62837 147 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 RPL19P84098 196 aaKnown RBP10.14□□□□□ -0.79
TPM3-219ENST00000509409 ZNF56Q15929 161 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 BAGE2Q86Y30 109 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 MBD3L1Q8WWY6 194 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
TPM3-219ENST00000509409 DMBT1Q9UGM3 2413 aaPredicted RBP10.13□□□□□ -0.79
TPM3-219ENST00000509409 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
TPM3-219ENST00000509409 UMAD1C9J7I0 102 aa10.13□□□□□ -0.79
TPM3-219ENST00000509409 RAB4BP61018 213 aa10.13□□□□□ -0.79
TPM3-219ENST00000509409 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
TPM3-219ENST00000509409 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.13□□□□□ -0.79
TPM3-219ENST00000509409 ZNF471Q9BX82 626 aaPredicted RBP10.13□□□□□ -0.79
TPM3-219ENST00000509409 MYCBP2O75592 4640 aa10.13□□□□□ -0.79
TPM3-219ENST00000509409 FLG2Q5D862 2391 aaPredicted RBP10.12□□□□□ -0.79
TPM3-219ENST00000509409 MUC21A0A0G2JKD1 596 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 MUC21A0A140T8X8 626 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 F5H697 171 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 J3QL48 77 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 Q0VG73 95 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 SPANXN1Q5VSR9 72 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 PRR27Q6MZM9 219 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 OR10AG1Q8NH19 301 aa10.12□□□□□ -0.79
TPM3-219ENST00000509409 KANTRA0A1W2PQU2 76 aa10.11□□□□□ -0.79
TPM3-219ENST00000509409 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
TPM3-219ENST00000509409 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
TPM3-219ENST00000509409 OR10G8Q8NGN5 311 aa10.11□□□□□ -0.79
TPM3-219ENST00000509409 TRBV6-8A0A0A6YYG3 113 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 A0A0D9SG52 128 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 CRPP02741 224 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 CXCL1P09341 107 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 SMIM17P0DL12 118 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 ZNF345Q14585 488 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 Q6ZSA8 131 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 TMUB2Q71RG4 321 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 C15orf54Q8N8G6 183 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
TPM3-219ENST00000509409 C1orf43Q9BWL3 253 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms