RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ZNF355PQ9NSJ1 428 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 TIMM8BQ9Y5J9 83 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-209ENST00000508871 RP1P56715 2156 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 IGHV1-18A0A0C4DH31 117 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 C3orf84H3BNL1 204 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 SOCS1O15524 211 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 ZFP36P26651 326 aaKnown RBP2.9□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF818PQ6ZRF7 136 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 DSCR8Q96T75 97 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 MED12Q93074 2177 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 IGKV1D-33P01593 117 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 IGKV1-33P01594 117 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 MED14OSP0DP75 135 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 IGFBP7Q16270 282 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 Q6P435 159 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 TVP23CQ96ET8 276 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 LINC00526Q96FQ7 95 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 FAM103A1Q9BTL3 118 aaKnown RBP2.89□□□□□ -1.95
NEDD4-209ENST00000508871 TRAV10A0A0B4J240 114 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 H3BPC8 53 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 SOCS3O14543 225 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 NDUFC1O43677 76 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 PSMG4Q5JS54 123 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 FOXI2Q6ZQN5 318 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 KLHL30-AS1Q8NEE0 82 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 TM2D3Q9BRN9 247 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 FAM215AQ9Y5M1 114 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 IGLV3-9A0A075B6K5 115 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 IGHV3-16A0A0C4DH30 117 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 CTXND1A0A1B0GTU2 59 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 IZUMO1RA6ND01 250 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 OOSP1A8MZH6 123 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 SPINK2P20155 84 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 TMEM14EPQ6UXP3 125 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 C14orf132Q9NPU4 83 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF492Q9P255 531 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 REV3LO60673 3130 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 TCRBV4S1A1TA0A5B7 111 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 C15orf65H3BRN8 121 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 COX7CP15954 63 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF80P51504 273 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-209ENST00000508871 PRR15Q8IV56 129 aa2.89□□□□□ -1.95
NEDD4-209ENST00000508871 CHD3Q12873 2000 aaKnown RBP2.88□□□□□ -1.95
NEDD4-209ENST00000508871 TRBV6-7A0A0A0MS04 114 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 LINC00313P59037 77 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 LMO4P61968 165 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 OPRPNQ99935 248 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-209ENST00000508871 IGKV1-12A0A0C4DH73 117 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 hADV29S1A0JD25 119 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 H0YJW9 148 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 LEPROTL1O95214 131 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 IGKV1D-12P01611 117 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 LYZL1Q6UWQ5 148 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 C2orf91Q6ZV80 131 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 KLF14Q8TD94 323 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-209ENST00000508871 DCANP1Q8TF63 244 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 FAM19A4Q96LR4 140 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 MINOS1-NBL1R4GNA1 71 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 K7EQG2 157 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 GZMBP10144 247 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 CCL8P80075 99 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF826PQ6ZT77 177 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF747Q9BV97 191 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 TRBV7-6A0A0J9YX20 115 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 LHBP01229 141 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 Q6AWC8 147 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 LSM10Q969L4 123 aaKnown RBP2.88□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF414Q96IQ9 312 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 HHLA3Q9XRX5 114 aa2.88□□□□□ -1.95
NEDD4-209ENST00000508871 CEP350Q5VT06 3117 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 IGHV7-4-1A0A0J9YVY3 117 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 MIR7-3HGQ8N6C7 128 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 POM121L12Q8N7R1 296 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 LINC00574Q9H8X3 128 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 COLCA2A8K830 154 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 D6R8Y8 96 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 PIGYQ3MUY2 71 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 MUSTN1Q8IVN3 82 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 C8orf17Q9NRJ1 99 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 MDFICQ9P1T7 246 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 RAI1Q7Z5J4 1906 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-209ENST00000508871 KIF26BQ2KJY2 2108 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 DOCK10Q96BY6 2186 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 COL10A1Q03692 680 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 DPH3Q96FX2 82 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 H3BMM0 161 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 H3BSH0 61 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 ERC2-IT1O76042 136 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 IGKV1-5P01602 117 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 PATE4P0C8F1 98 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 DEFB116Q30KQ4 102 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 RNASE6Q93091 150 aaKnown RBP2.87□□□□□ -1.95
NEDD4-209ENST00000508871 UBE2WQ96B02 151 aa2.87□□□□□ -1.95
NEDD4-209ENST00000508871 M0R378 163 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 MT-ATP8P03928 68 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 C17orf58Q2M2W7 97 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 C10orf91Q5T1B1 145 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 C5orf38Q86SI9 138 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 TMEM141Q96I45 108 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms