RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 A0A087WW49 117 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 SPINK13Q1W4C9 94 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 SAMD5Q5TGI4 173 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
LIN54-207ENST00000508171 CR1P17927 2039 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 MYO9AB2RTY4 2548 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 K7EQG2 157 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 TSHBP01222 138 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 CRYGDP07320 174 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 POLR2KP53803 58 aaKnown RBP8.12□□□□□ -1.11
LIN54-207ENST00000508171 RPL39P62891 51 aaKnown RBP8.12□□□□□ -1.11
LIN54-207ENST00000508171 Q8N1Y9 231 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 SPCS1Q9Y6A9 102 aa8.12□□□□□ -1.11
LIN54-207ENST00000508171 TLN2Q9Y4G6 2542 aa8.11□□□□□ -1.11
LIN54-207ENST00000508171 IGHV3-16A0A0C4DH30 117 aa8.11□□□□□ -1.11
LIN54-207ENST00000508171 PPP1R17O96001 155 aa8.11□□□□□ -1.11
LIN54-207ENST00000508171 EMP1P54849 157 aa8.11□□□□□ -1.11
LIN54-207ENST00000508171 SNRPD3P62318 126 aaKnown RBP8.11□□□□□ -1.11
LIN54-207ENST00000508171 BEX4Q9NWD9 120 aaPredicted RBP8.11□□□□□ -1.11
LIN54-207ENST00000508171 SAP30O75446 220 aa8.11□□□□□ -1.11
LIN54-207ENST00000508171 ZFP2Q6ZN57 461 aa8.11□□□□□ -1.11
LIN54-207ENST00000508171 TP53TG1Q9Y2A0 90 aa8.11□□□□□ -1.11
LIN54-207ENST00000508171 OR11H12B2RN74 326 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 UBR5O95071 2799 aaPredicted RBP8.1□□□□□ -1.11
LIN54-207ENST00000508171 HOXD3P31249 432 aaPredicted RBP8.1□□□□□ -1.11
LIN54-207ENST00000508171 OR11H1Q8NG94 326 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 OR11H2Q8NH07 326 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 HIST1H4GQ99525 98 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 VPREB3Q9UKI3 123 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 MYMXA0A1B0GTQ4 84 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 FABP2P12104 132 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 KRTAP10-9P60411 292 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 SAMD13Q5VXD3 122 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 C18orf65Q6ZTR6 163 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 C9orf85Q96MD7 179 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 ZNF702PQ9H963 129 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 CYSLTR1Q9Y271 337 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 NAV2Q8IVL1 2488 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 NF1P21359 2839 aa8.1□□□□□ -1.11
LIN54-207ENST00000508171 IGIPA6NJ69 53 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 LGALS1P09382 135 aaKnown RBP8.09□□□□□ -1.11
LIN54-207ENST00000508171 DEFB136Q30KP8 78 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 NBPF19A0A087WUL8 3843 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 TMEM89A2RUT3 159 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 J3QLI3 93 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 VCYO14598 125 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 HOXA3O43365 443 aaPredicted RBP8.09□□□□□ -1.11
LIN54-207ENST00000508171 CD300EQ496F6 205 aaPredicted RBP8.09□□□□□ -1.11
LIN54-207ENST00000508171 Q6YL49 198 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 BBC3Q96PG8 261 aaPredicted RBP8.09□□□□□ -1.11
LIN54-207ENST00000508171 PRADC1Q9BSG0 188 aa8.09□□□□□ -1.11
LIN54-207ENST00000508171 ZNF256Q9Y2P7 627 aaPredicted RBP8.09□□□□□ -1.11
LIN54-207ENST00000508171 HIST2H2BDQ6DRA6 164 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 MORN3Q6PF18 240 aaPredicted RBP8.08□□□□□ -1.12
LIN54-207ENST00000508171 KLHL30-AS1Q8NEE0 82 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 CHD6Q8TD26 2715 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 TRBV7-3A0A075B6L6 115 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 IGHV1OR15-1A0A075B7D0 117 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 C11orf86A6NJI1 115 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 E9PLD3 99 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 LGALS9O00182 355 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 ZNF56Q15929 161 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 C12orf74Q32Q52 190 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 ODF3Q96PU9 254 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 KIR2DL4Q99706 377 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 VPS25Q9BRG1 176 aa8.08□□□□□ -1.12
LIN54-207ENST00000508171 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 M0QY20 66 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 HTN1P15515 57 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 RPL32P62910 135 aaKnown RBP8.07□□□□□ -1.12
LIN54-207ENST00000508171 TAL2Q16559 108 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 UBE2E2Q96LR5 201 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 APCP25054 2843 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 AKAP9Q99996 3911 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 TRBV27A0A0K0K1C4 114 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 PRM2P04554 102 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 ELANEP08246 267 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 IGHV4-31P0DP07 118 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 COX6B1P14854 86 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 SLURP1P55000 103 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 AMTNQ6UX39 209 aa8.07□□□□□ -1.12
LIN54-207ENST00000508171 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
LIN54-207ENST00000508171 KNCNA6PVL3 124 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 IGLL5B9A064 214 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 FSHBP01225 129 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 RBMY1A1P0DJD3 496 aaKnown RBP8.06□□□□□ -1.12
LIN54-207ENST00000508171 RBMY1CP0DJD4 496 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 RBMY1FQ15415 496 aaKnown RBP8.06□□□□□ -1.12
LIN54-207ENST00000508171 ZNF876PQ49A33 203 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 OR5A1Q8NGJ0 315 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 PLEKHB2Q96CS7 222 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 DUX3Q96PT4 197 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 ZNF815PA8K554 130 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 K7ERU9 68 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 PMVKQ15126 192 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 SONP18583 2426 aaKnown RBP8.06□□□□□ -1.12
LIN54-207ENST00000508171 SYT8Q8NBV8 401 aa8.06□□□□□ -1.12
LIN54-207ENST00000508171 EPG5Q9HCE0 2579 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms