RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 A4D1N5 150 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 C9JAW5 83 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 J3KRW8 73 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 GNRH2O43555 120 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 LY6HO94772 140 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3-33P01772 117 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 RPL13AP40429 203 aaKnown RBP3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 XGP55808 180 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 LINC00315P59091 139 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 KLRB1Q12918 225 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 GAGE5Q13069 117 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 GAGE6Q13070 117 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 Q1RN00 199 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 PRR30Q53SZ7 412 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 TTC32Q5I0X7 151 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 LINC01356Q8N9X3 169 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 KLHL30-AS1Q8NEE0 82 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 COPS9Q8WXC6 57 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 AJUBAQ96IF1 538 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 CARD19Q96LW7 228 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 NCOR1O75376 2440 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 PKDREJQ9NTG1 2253 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 TRBV10-2A0A0K0K1G8 114 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 H3BMM0 161 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 H3BT86 120 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 I3L3M4 83 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 RHODO00212 210 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 TSHBP01222 138 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 IFITM1P13164 125 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 SRD5A1P18405 259 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 SNRPD3P62318 126 aaKnown RBP3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 ZNF56Q15929 161 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 LINC01620Q4KN68 170 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 C20orf203Q8NBC4 194 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 TMEM263Q8WUH6 116 aaKnown RBP3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 UBE2WQ96B02 151 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 CITED1Q99966 193 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 RHPN1-AS1Q9BWJ2 59 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 EDA2RQ9HAV5 297 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 TRIOO75962 3097 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 AGRNO00468 2067 aa3.71□□□□□ -1.82
HMGB3P16-201ENST00000508037 VCANP13611 3396 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGHV1OR15-1A0A075B7D0 117 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 TRAV2A0A0B4J234 112 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGHV3-16A0A0C4DH30 117 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 A0A0J9YXY3 114 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 FAM240AA0A1B0GVK7 77 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 TMEM89A2RUT3 159 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 LINC01548A6NM66 108 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 M0QY20 66 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 TIMM17BO60830 172 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGHG2P01859 326 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 PF4V1P10720 104 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 ZNF22P17026 224 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 LMO4P61968 165 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 ADORA2A-AS1P86434 159 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 SFTA2Q6UW10 78 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 UNQ9165/PRO28630Q6UXU0 137 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 Q6ZQT7 251 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 MUSTN1Q8IVN3 82 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 ZNRF2Q8NHG8 242 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 PTH2Q96A98 100 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 RAX2Q96IS3 184 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 CLUHP3Q96NS8 147 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 AMELXQ99217 191 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 TIMM21Q9BVV7 248 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 SPANXCQ9NY87 97 aa3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 ZNF256Q9Y2P7 627 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P16-201ENST00000508037 ROS1P08922 2347 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 A0A087WWL8 130 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 TRAV12-3A0A0B4J271 114 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 GAGE12JA6NER3 117 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 GAGE7O76087 117 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 ACYP1P07311 99 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 GAGE12FP0CL80 117 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 GAGE12GP0CL81 117 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 GAGE12IP0CL82 117 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 CD28P10747 220 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 EMP1P54849 157 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 NDUFV3P56181 108 aaKnown RBP3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 TSPEAR-AS2P59090 65 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 RPL39P62891 51 aaKnown RBP3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 GAGE4Q13068 117 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 FHL3Q13643 280 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 PIK3CD-AS1Q5SR53 167 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 FAM74A4Q5TZK3 123 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 C2orf82Q6UX34 121 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 TMEM219Q86XT9 240 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 Q8N1Y9 231 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 RNF152Q8N8N0 203 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 UBTD1Q9HAC8 227 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 ZNF318Q5VUA4 2279 aa3.69□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGLV4-3A0A075B6K6 122 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 IGHV1-58A0A0C4DH39 117 aa3.68□□□□□ -1.82
HMGB3P16-201ENST00000508037 TINCRA0A1B0GVN0 87 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms