RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CKS1BP61024 79 aa10.06□□□□□ -0.8
SNCAIP-209ENST00000508017 PMVKQ15126 192 aa10.06□□□□□ -0.8
SNCAIP-209ENST00000508017 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
SNCAIP-209ENST00000508017 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
SNCAIP-209ENST00000508017 PPP1R17O96001 155 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 CFC1BP0CG36 223 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 CFC1P0CG37 223 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 HERVK_113P61574 105 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 A0A087WW49 117 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 IGHV1-69DA0A0B4J2H0 117 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 IGHV3-30P01768 117 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 IGHV3-30-5P0DP03 117 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 CRYBG3Q68DQ2 2970 aa10.05□□□□□ -0.8
SNCAIP-209ENST00000508017 F5H697 171 aa10.04□□□□□ -0.8
SNCAIP-209ENST00000508017 MT-ATP8P03928 68 aa10.04□□□□□ -0.8
SNCAIP-209ENST00000508017 LY6EQ16553 131 aa10.04□□□□□ -0.8
SNCAIP-209ENST00000508017 RHPN1-AS1Q9BWJ2 59 aa10.04□□□□□ -0.8
SNCAIP-209ENST00000508017 AMELXQ99217 191 aa10.04□□□□□ -0.8
SNCAIP-209ENST00000508017 OPRPNQ99935 248 aaPredicted RBP10.04□□□□□ -0.8
SNCAIP-209ENST00000508017 SDHAF1A6NFY7 115 aa10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 CRIP2P52943 208 aaPredicted RBP10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 TCTEX1D4Q5JR98 221 aa10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 TRAV12-3A0A0B4J271 114 aa10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 XGP55808 180 aa10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 FAM159AQ6UWV7 190 aa10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 SLC25A29Q8N8R3 303 aa10.03□□□□□ -0.8
SNCAIP-209ENST00000508017 KLLNB2CW77 178 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 VCYO14598 125 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 SPINK8P0C7L1 97 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 PF4V1P10720 104 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 RPL32P62910 135 aaKnown RBP10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 PAPPA-AS1Q5QFB9 102 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 KIR2DL4Q99706 377 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 ZNF256Q9Y2P7 627 aaPredicted RBP10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 ZNF876PQ49A33 203 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 TEN1Q86WV5 123 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 TMEM141Q96I45 108 aa10.02□□□□□ -0.81
SNCAIP-209ENST00000508017 J3QQQ9 107 aa10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 EIF4EBP3O60516 100 aaPredicted RBP10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 NBL1P41271 181 aa10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 CRYBA4P53673 196 aa10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 Q6ZUT4 128 aa10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 C10orf126Q8N4M7 172 aa10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 PPDPFLQ8WWR9 84 aa10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 TIMM17AQ99595 171 aa10.01□□□□□ -0.81
SNCAIP-209ENST00000508017 CELSR2Q9HCU4 2923 aa10□□□□□ -0.81
SNCAIP-209ENST00000508017 IGHV1-69P01742 117 aa10□□□□□ -0.81
SNCAIP-209ENST00000508017 KLRB1Q12918 225 aa10□□□□□ -0.81
SNCAIP-209ENST00000508017 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 TRBV7-9A0A0J9YWB2 115 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 TRBV27A0A0K0K1C4 114 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 BLCAPP62952 87 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 LYRM7Q5U5X0 104 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 ANKRD29Q8N6D5 301 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 GEMIN7Q9H840 131 aaKnown RBP9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 PRO1854Q9UHT4 67 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 SCGB1C2P0DMR2 95 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 Q5PR19 223 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 SBSPONQ8IVN8 264 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 RAX2Q96IS3 184 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
SNCAIP-209ENST00000508017 TRAV12-2A0A075B6T6 113 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 TRAV26-1A0A087WT03 109 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 A4D1N5 150 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 A8MWV9 139 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 LGALS9O00182 355 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 USMG5Q96IX5 58 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 ZNF56Q15929 161 aa9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 DAZ1Q9NQZ3 744 aaKnown RBP9.98□□□□□ -0.81
SNCAIP-209ENST00000508017 H3BUX3 64 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 H7C2G1 150 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 IGHG2P01859 326 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 DCANP1Q8TF63 244 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 ZNF580Q9UK33 172 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 TRBV6-5A0A0K0K1A5 114 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 P0DMU3 169 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 FAM231AP0DMU4 169 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 FAM231CP0DMU5 169 aa9.97□□□□□ -0.81
SNCAIP-209ENST00000508017 TRAV2A0A0B4J234 112 aa9.96□□□□□ -0.81
SNCAIP-209ENST00000508017 IGHV3-16A0A0C4DH30 117 aa9.96□□□□□ -0.81
SNCAIP-209ENST00000508017 TMEM223A0PJW6 202 aa9.96□□□□□ -0.81
SNCAIP-209ENST00000508017 M0QY20 66 aa9.96□□□□□ -0.81
SNCAIP-209ENST00000508017 IGHV4-39P01824 125 aa9.96□□□□□ -0.82
SNCAIP-209ENST00000508017 ZNF688P0C7X2 276 aa9.96□□□□□ -0.82
SNCAIP-209ENST00000508017 C9orf85Q96MD7 179 aa9.96□□□□□ -0.82
SNCAIP-209ENST00000508017 SORL1Q92673 2214 aa9.96□□□□□ -0.82
SNCAIP-209ENST00000508017 C9JAW5 83 aa9.95□□□□□ -0.82
SNCAIP-209ENST00000508017 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
SNCAIP-209ENST00000508017 TMEM263Q8WUH6 116 aaKnown RBP9.95□□□□□ -0.82
SNCAIP-209ENST00000508017 H3BUA1 57 aa9.95□□□□□ -0.82
SNCAIP-209ENST00000508017 LEPROTO15243 131 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms