RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CD7P09564 240 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 ID1P41134 155 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 GTF2H5Q6ZYL4 71 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 WFDC11Q8NEX6 87 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 PDZD2O15018 2839 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 PRSS47A8MTI9 375 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 LGALS1P09382 135 aaKnown RBP10.8□□□□□ -0.68
DDX41-208ENST00000507955 LAGE3Q14657 143 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 FAM159AQ6UWV7 190 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 ATP5LO75964 103 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 PRM2P04554 102 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 KHDC1LQ5JSQ8 128 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 APRG1Q8IVJ8 170 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 C11orf44Q8N8P7 122 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 MDFICQ9P1T7 246 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 HIGD1BQ9P298 99 aa10.8□□□□□ -0.68
DDX41-208ENST00000507955 SPCS1Q9Y6A9 102 aa10.79□□□□□ -0.68
DDX41-208ENST00000507955 PHLDA1Q8WV24 401 aaPredicted RBP10.79□□□□□ -0.68
DDX41-208ENST00000507955 DPH3P1Q9H4G8 78 aa10.79□□□□□ -0.68
DDX41-208ENST00000507955 NOTCH3Q9UM47 2321 aa10.79□□□□□ -0.68
DDX41-208ENST00000507955 HTN1P15515 57 aa10.78□□□□□ -0.68
DDX41-208ENST00000507955 A0A0J9YX75 114 aa10.78□□□□□ -0.68
DDX41-208ENST00000507955 K7EQG2 157 aa10.78□□□□□ -0.68
DDX41-208ENST00000507955 K7ERU9 68 aa10.78□□□□□ -0.68
DDX41-208ENST00000507955 TCTEX1D4Q5JR98 221 aa10.78□□□□□ -0.68
DDX41-208ENST00000507955 SMIM2Q9BVW6 85 aa10.78□□□□□ -0.68
DDX41-208ENST00000507955 SMIM13P0DJ93 91 aa10.77□□□□□ -0.68
DDX41-208ENST00000507955 SUMO2P61956 95 aaKnown RBP10.77□□□□□ -0.68
DDX41-208ENST00000507955 FAM74A4Q5TZK3 123 aa10.77□□□□□ -0.68
DDX41-208ENST00000507955 MYOZ3Q8TDC0 251 aa10.77□□□□□ -0.68
DDX41-208ENST00000507955 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.68
DDX41-208ENST00000507955 A0A087WX48 190 aa10.77□□□□□ -0.69
DDX41-208ENST00000507955 SNRPD3P62318 126 aaKnown RBP10.77□□□□□ -0.69
DDX41-208ENST00000507955 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
DDX41-208ENST00000507955 KNCNA6PVL3 124 aa10.76□□□□□ -0.69
DDX41-208ENST00000507955 ELANEP08246 267 aa10.76□□□□□ -0.69
DDX41-208ENST00000507955 OR11H1Q8NG94 326 aa10.76□□□□□ -0.69
DDX41-208ENST00000507955 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
DDX41-208ENST00000507955 LINC00315P59091 139 aa10.76□□□□□ -0.69
DDX41-208ENST00000507955 Q8N1Y9 231 aa10.76□□□□□ -0.69
DDX41-208ENST00000507955 NHP2Q9NX24 153 aaKnown RBP10.76□□□□□ -0.69
DDX41-208ENST00000507955 JMJD1CQ15652 2540 aa10.76□□□□□ -0.69
DDX41-208ENST00000507955 CEND1Q8N111 149 aa10.75□□□□□ -0.69
DDX41-208ENST00000507955 F5H697 171 aa10.75□□□□□ -0.69
DDX41-208ENST00000507955 RIPPLY3P57055 190 aa10.75□□□□□ -0.69
DDX41-208ENST00000507955 COTL1Q14019 142 aa10.75□□□□□ -0.69
DDX41-208ENST00000507955 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
DDX41-208ENST00000507955 KIF25-AS1Q9Y6Z4 181 aa10.75□□□□□ -0.69
DDX41-208ENST00000507955 FABP2P12104 132 aa10.74□□□□□ -0.69
DDX41-208ENST00000507955 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
DDX41-208ENST00000507955 TMEM89A2RUT3 159 aa10.74□□□□□ -0.69
DDX41-208ENST00000507955 G3V4G9 280 aa10.73□□□□□ -0.69
DDX41-208ENST00000507955 RBMY1A1P0DJD3 496 aaKnown RBP10.73□□□□□ -0.69
DDX41-208ENST00000507955 RBMY1CP0DJD4 496 aa10.73□□□□□ -0.69
DDX41-208ENST00000507955 HLA-DRB4P13762 266 aa10.73□□□□□ -0.69
DDX41-208ENST00000507955 RBMY1FQ15415 496 aaKnown RBP10.73□□□□□ -0.69
DDX41-208ENST00000507955 OR5A1Q8NGJ0 315 aa10.73□□□□□ -0.69
DDX41-208ENST00000507955 HLA-DRB4X5D2U9 266 aa10.73□□□□□ -0.69
DDX41-208ENST00000507955 TRBV7-9A0A0J9YWB2 115 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
DDX41-208ENST00000507955 DEFB131AP59861 70 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 UNC79Q9P2D8 2635 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 A0A1W2PRX2 142 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 LGALS9O00182 355 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 DLX4Q92988 240 aaPredicted RBP10.72□□□□□ -0.69
DDX41-208ENST00000507955 NOTCH2Q04721 2471 aa10.72□□□□□ -0.69
DDX41-208ENST00000507955 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
DDX41-208ENST00000507955 FASNP49327 2511 aaKnown RBP10.72□□□□□ -0.69
DDX41-208ENST00000507955 F8VRH5 84 aa10.71□□□□□ -0.69
DDX41-208ENST00000507955 TOMM6Q96B49 74 aa10.71□□□□□ -0.69
DDX41-208ENST00000507955 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
DDX41-208ENST00000507955 HECTD1Q9ULT8 2610 aa10.71□□□□□ -0.69
DDX41-208ENST00000507955 PLNP26678 52 aa10.71□□□□□ -0.69
DDX41-208ENST00000507955 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
DDX41-208ENST00000507955 TMEM61Q8N0U2 210 aa10.71□□□□□ -0.69
DDX41-208ENST00000507955 H7C1H1 209 aa10.71□□□□□ -0.7
DDX41-208ENST00000507955 MED14OSP0DP75 135 aa10.71□□□□□ -0.7
DDX41-208ENST00000507955 AMTNQ6UX39 209 aa10.71□□□□□ -0.7
DDX41-208ENST00000507955 LRRC75A-AS1Q8N1F1 130 aa10.71□□□□□ -0.7
DDX41-208ENST00000507955 NEXN-AS1Q8NBZ9 246 aa10.71□□□□□ -0.7
DDX41-208ENST00000507955 KLHL30-AS1Q8NEE0 82 aa10.71□□□□□ -0.7
DDX41-208ENST00000507955 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
DDX41-208ENST00000507955 NXPH4O95158 308 aa10.7□□□□□ -0.7
DDX41-208ENST00000507955 EMP1P54849 157 aa10.7□□□□□ -0.7
DDX41-208ENST00000507955 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
DDX41-208ENST00000507955 RNF152Q8N8N0 203 aa10.7□□□□□ -0.7
DDX41-208ENST00000507955 GCN1Q92616 2671 aaKnown RBP10.7□□□□□ -0.7
DDX41-208ENST00000507955 IGHV3-73A0A0B4J1V6 119 aa10.7□□□□□ -0.7
DDX41-208ENST00000507955 DUSP14O95147 198 aaKnown RBP10.7□□□□□ -0.7
DDX41-208ENST00000507955 C20orf78Q9BR46 151 aa10.7□□□□□ -0.7
DDX41-208ENST00000507955 ESM1Q9NQ30 184 aa10.7□□□□□ -0.7
DDX41-208ENST00000507955 CHTOPQ9Y3Y2 248 aaKnown RBP10.7□□□□□ -0.7
DDX41-208ENST00000507955 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 IGLL5B9A064 214 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 E9PLD3 99 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 Q6ZSV7 163 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms