RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 SAMD10Q9BYL1 202 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 PET100P0DJ07 73 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 GCHFRP30047 84 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 CDC34P49427 236 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 FLI1Q01543 452 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 SMUG1Q53HV7 270 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 PIK3CD-AS1Q5SR53 167 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 CYB561D1Q8N8Q1 229 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 OR2G3Q8NGZ4 309 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 CIRBP-AS1Q8TBR5 109 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 S100ZQ8WXG8 99 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 NDFIP1Q9BT67 221 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 CHAC1Q9BUX1 264 aa6.72□□□□□ -1.33
PDGFRA-205ENST00000507536 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 RNF222A6NCQ9 220 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 A8MWV9 139 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 PRNTQ86SH4 94 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 NIT1Q86X76 327 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 OR2T35Q8NGX2 323 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 RAB24Q969Q5 203 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 EPDR1Q9UM22 224 aa6.71□□□□□ -1.34
PDGFRA-205ENST00000507536 TRAV34A0A0B4J273 112 aa6.7□□□□□ -1.34
PDGFRA-205ENST00000507536 PFDN1O60925 122 aa6.7□□□□□ -1.34
PDGFRA-205ENST00000507536 ATRAIDQ6UW56 229 aa6.7□□□□□ -1.34
PDGFRA-205ENST00000507536 SH3BGRL3Q9H299 93 aa6.7□□□□□ -1.34
PDGFRA-205ENST00000507536 IL36BQ9NZH7 164 aa6.7□□□□□ -1.34
PDGFRA-205ENST00000507536 ARL2-SNX15V9GYD0 113 aa6.7□□□□□ -1.34
PDGFRA-205ENST00000507536 A0A087WWC5 75 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 H3BVH4 76 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 SSNA1O43805 119 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 OXTP01178 125 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 ATP6V0CP27449 155 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 CRIP1P50238 77 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 HNRNPA3P51991 378 aaKnown RBP6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 LGALSLQ3ZCW2 172 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 ZFP69Q49AA0 526 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 TOR2AQ5JU69 321 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 DNLZQ5SXM8 178 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 SERTAD4-AS1Q5TG53 156 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 HSD17B11Q8NBQ5 300 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 PSMG3Q9BT73 122 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 KLK12Q9UKR0 248 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 COX11Q9Y6N1 276 aa6.69□□□□□ -1.34
PDGFRA-205ENST00000507536 IGKV2D-24A0A075B6R9 120 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 RBFOX3A6NFN3 312 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 K7EQM0 130 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 IGLV2-8P01709 118 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 ASIPP42127 132 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 ZNF726P1Q15940 193 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 Q86TA4 180 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 Q8N976 141 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 TNXBP22105 4242 aa6.68□□□□□ -1.34
PDGFRA-205ENST00000507536 KRBOX1C9JBD0 128 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 ATP6V1G1O75348 118 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 CXorf1O96002 111 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 S100A4P26447 101 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 FGF8P55075 233 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 SAPCD1Q5SSQ6 148 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 COX8CQ7Z4L0 72 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 UBE2WQ96B02 151 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 ZC2HC1AQ96GY0 325 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 TMEM167BQ9NRX6 74 aa6.67□□□□□ -1.34
PDGFRA-205ENST00000507536 LRP2P98164 4655 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 A0A087WWL8 130 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 A0A1W2PRE2 83 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 FABP5P3A8MUU1 101 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 B4DEV8 164 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 RHODO00212 210 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 ARMS2P0C7Q2 107 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 SERF2P84101 59 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 FAM74A4Q5TZK3 123 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 RMI2Q96E14 147 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 DAZAP1Q96EP5 407 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 SFRP2Q96HF1 295 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 CHCHD7Q9BUK0 85 aa6.66□□□□□ -1.34
PDGFRA-205ENST00000507536 M0R036 132 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 PEX7O00628 323 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 SH2D1AO60880 128 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 UBE2D3P61077 147 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 UBE2D2P62837 147 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 Q5BKY6 102 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 ENHOQ6UWT2 76 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 TNFSF18Q9UNG2 199 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 URGCP-MRPS24S4R325 110 aa6.65□□□□□ -1.34
PDGFRA-205ENST00000507536 A0A1B0GVG6 124 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 GRIFINA4D1Z8 144 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 FAM74A7A6NL05 159 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 PANO1I0J062 215 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 MBP02144 154 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 UBE2G2P60604 165 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 MPV17L2Q567V2 206 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 OR11H4Q8NGC9 324 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 ACTR3CQ9C0K3 210 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
PDGFRA-205ENST00000507536 A0A087WX48 190 aa6.63□□□□□ -1.35
PDGFRA-205ENST00000507536 TRBV10-1A0A0K0K1A3 114 aa6.63□□□□□ -1.35
PDGFRA-205ENST00000507536 ZNF674Q2M3X9 581 aa6.63□□□□□ -1.35
PDGFRA-205ENST00000507536 RPL7L1Q6DKI1 246 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms