RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 SMAD5-AS1Q9Y6J3 95 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 NRXN3Q9Y4C0 1643 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 COL5A3P25940 1745 aaPredicted RBP4.75□□□□□ -1.65
CDH9-202ENST00000505020 NUMA1Q14980 2115 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 FXYD2P54710 66 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 SLC48A1Q6P1K1 146 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 SMIM5Q71RC9 77 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 C9orf106Q8NAJ2 232 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 TMEM14AQ9Y6G1 99 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 RGPD8O14715 1765 aaPredicted RBP4.74□□□□□ -1.65
CDH9-202ENST00000505020 RGPD5Q99666 1765 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 A0A0G2JND7 137 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 A6NIN4 97 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 C15orf32Q32M92 178 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 C9orf116Q5BN46 136 aaPredicted RBP4.74□□□□□ -1.65
CDH9-202ENST00000505020 LINC00643Q86TS7 51 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 NRAPQ86VF7 1730 aa4.74□□□□□ -1.65
CDH9-202ENST00000505020 MEGF6O75095 1541 aa4.73□□□□□ -1.65
CDH9-202ENST00000505020 NNATQ16517 81 aa4.73□□□□□ -1.65
CDH9-202ENST00000505020 TMEM170BQ5T4T1 132 aa4.73□□□□□ -1.65
CDH9-202ENST00000505020 SCN4AP35499 1836 aa4.73□□□□□ -1.65
CDH9-202ENST00000505020 PLXNA2O75051 1894 aa4.73□□□□□ -1.65
CDH9-202ENST00000505020 BTAF1O14981 1849 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 PTPRSQ13332 1948 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 MED12LQ86YW9 2145 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 H7C2G1 150 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 MGST1P10620 155 aaKnown RBP4.72□□□□□ -1.65
CDH9-202ENST00000505020 CASC2Q6XLA1 102 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 GREB1Q4ZG55 1949 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 KIAA1549Q9HCM3 1950 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 CASP8AP2Q9UKL3 1982 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 CDC42BPGQ6DT37 1551 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 ZNF56Q15929 161 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 MANBALQ9NQG1 85 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 ZNF355PQ9NSJ1 428 aa4.72□□□□□ -1.65
CDH9-202ENST00000505020 IGKV1D-42A0A075B6H8 117 aa4.71□□□□□ -1.66
CDH9-202ENST00000505020 A0A1W2PPR1 153 aa4.71□□□□□ -1.66
CDH9-202ENST00000505020 H3BPC8 53 aa4.71□□□□□ -1.66
CDH9-202ENST00000505020 LHBP01229 141 aa4.71□□□□□ -1.66
CDH9-202ENST00000505020 RPL36AP83881 106 aaKnown RBP4.71□□□□□ -1.66
CDH9-202ENST00000505020 FAM223AQ8IWN6 122 aa4.71□□□□□ -1.66
CDH9-202ENST00000505020 TVP23CQ96ET8 276 aa4.71□□□□□ -1.66
CDH9-202ENST00000505020 CYP4F30PQ9H0H9 118 aa4.71□□□□□ -1.66
CDH9-202ENST00000505020 WDR90Q96KV7 1748 aa4.7□□□□□ -1.66
CDH9-202ENST00000505020 PLXNA1Q9UIW2 1896 aa4.7□□□□□ -1.66
CDH9-202ENST00000505020 COL14A1Q05707 1796 aaKnown RBP4.7□□□□□ -1.66
CDH9-202ENST00000505020 IGLV2-11P01706 119 aa4.7□□□□□ -1.66
CDH9-202ENST00000505020 SMIM11AP58511 58 aa4.7□□□□□ -1.66
CDH9-202ENST00000505020 ZCCHC23Q6ZST2 131 aa4.7□□□□□ -1.66
CDH9-202ENST00000505020 LINC01565O15544 149 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 BCE1O60756 84 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 COX8AP10176 69 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 DSCR4P56555 118 aaPredicted RBP4.69□□□□□ -1.66
CDH9-202ENST00000505020 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 TMEM105Q8N8V8 129 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 TANC1Q9C0D5 1861 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 SCN3AQ9NY46 2000 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 NYNRINQ9P2P1 1898 aaKnown RBP4.69□□□□□ -1.66
CDH9-202ENST00000505020 TRBV10-3A0A0K0K1G6 114 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 C9orf129Q5T035 196 aaKnown RBP4.69□□□□□ -1.66
CDH9-202ENST00000505020 FAM215AQ9Y5M1 114 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 LCTP09848 1927 aa4.69□□□□□ -1.66
CDH9-202ENST00000505020 SIPA1L3O60292 1781 aaPredicted RBP4.69□□□□□ -1.66
CDH9-202ENST00000505020 C3orf79P0CE67 100 aa4.68□□□□□ -1.66
CDH9-202ENST00000505020 BPESC1Q9GZL8 116 aa4.68□□□□□ -1.66
CDH9-202ENST00000505020 C14orf132Q9NPU4 83 aa4.68□□□□□ -1.66
CDH9-202ENST00000505020 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
CDH9-202ENST00000505020 COL3A1P02461 1466 aaPredicted RBP4.67□□□□□ -1.66
CDH9-202ENST00000505020 C11orf86A6NJI1 115 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 PCNX2A6NKB5 2137 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 VMO1Q7Z5L0 202 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 TIMM21Q9BVV7 248 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 UTRNP46939 3433 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 MUC4Q99102 2169 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 FXYD6-FXYD2A0A087WZ82 144 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 H3BQ85 93 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 ZNF826PQ6ZT77 177 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 FXYD6Q9H0Q3 95 aa4.67□□□□□ -1.66
CDH9-202ENST00000505020 COL2A1P02458 1487 aaPredicted RBP4.66□□□□□ -1.66
CDH9-202ENST00000505020 TRBV7-1A0A0A6YYK4 115 aa4.66□□□□□ -1.66
CDH9-202ENST00000505020 IL4P05112 153 aa4.66□□□□□ -1.66
CDH9-202ENST00000505020 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
CDH9-202ENST00000505020 LAMB1P07942 1786 aa4.66□□□□□ -1.66
CDH9-202ENST00000505020 TRPM7Q96QT4 1865 aa4.66□□□□□ -1.66
CDH9-202ENST00000505020 EML5Q05BV3 1969 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 PANO1I0J062 215 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 TFF1P04155 84 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 PYDC2Q56P42 97 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 LCE4AQ5TA78 99 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 C20orf166-AS1Q96NR2 134 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 HILPDAQ9Y5L2 63 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 ANKRD50Q9ULJ7 1429 aa4.65□□□□□ -1.66
CDH9-202ENST00000505020 UBE2D3P61077 147 aa4.65□□□□□ -1.67
CDH9-202ENST00000505020 UBE2D2P62837 147 aa4.65□□□□□ -1.67
CDH9-202ENST00000505020 ZNF791Q3KP31 576 aaPredicted RBP4.65□□□□□ -1.67
CDH9-202ENST00000505020 PRO1854Q9UHT4 67 aa4.65□□□□□ -1.67
CDH9-202ENST00000505020 CABIN1Q9Y6J0 2220 aa4.64□□□□□ -1.67
CDH9-202ENST00000505020 E9PCH4 1651 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms