RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 SNAPC5O75971 98 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 NPC2P61916 151 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 KRTAP21-3Q3LHN1 58 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 Q56UQ5 140 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 XAF1Q6GPH4 301 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 NDUFA11Q86Y39 141 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 C5orf56Q8N8D9 126 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 RREB1Q92766 1687 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 FLG2Q5D862 2391 aaPredicted RBP1.7□□□□□ -2.14
HERC3-209ENST00000504994 EIF4G3O43432 1585 aaKnown RBP1.69□□□□□ -2.14
HERC3-209ENST00000504994 TRAV12-3A0A0B4J271 114 aa1.69□□□□□ -2.14
HERC3-209ENST00000504994 ANGP03950 147 aaKnown RBP1.69□□□□□ -2.14
HERC3-209ENST00000504994 Q6AWC8 147 aa1.69□□□□□ -2.14
HERC3-209ENST00000504994 RPL7L1Q6DKI1 246 aaKnown RBP1.69□□□□□ -2.14
HERC3-209ENST00000504994 Q6ZQY7 126 aa1.69□□□□□ -2.14
HERC3-209ENST00000504994 CCL19Q99731 98 aa1.69□□□□□ -2.14
HERC3-209ENST00000504994 PRRC2BQ5JSZ5 2229 aaKnown RBP1.68□□□□□ -2.14
HERC3-209ENST00000504994 ZNF142P52746 1687 aaPredicted RBP1.68□□□□□ -2.14
HERC3-209ENST00000504994 QRICH2Q9H0J4 1663 aa1.68□□□□□ -2.14
HERC3-209ENST00000504994 A6NIN4 97 aa1.68□□□□□ -2.14
HERC3-209ENST00000504994 CBLN1P23435 193 aa1.68□□□□□ -2.14
HERC3-209ENST00000504994 Q86TA4 180 aa1.68□□□□□ -2.14
HERC3-209ENST00000504994 C10orf82Q8WW14 230 aa1.68□□□□□ -2.14
HERC3-209ENST00000504994 CUL7Q14999 1698 aa1.67□□□□□ -2.14
HERC3-209ENST00000504994 TCRBV3S1A0A5B6 114 aa1.67□□□□□ -2.14
HERC3-209ENST00000504994 ATP6V1G2-DDX39BF2Z307 99 aa1.67□□□□□ -2.14
HERC3-209ENST00000504994 MRPS10P82664 201 aaKnown RBP1.67□□□□□ -2.14
HERC3-209ENST00000504994 RPRMQ9NS64 109 aa1.67□□□□□ -2.14
HERC3-209ENST00000504994 A2ML1A8K2U0 1454 aa1.67□□□□□ -2.14
HERC3-209ENST00000504994 ZNF518AQ6AHZ1 1483 aa1.67□□□□□ -2.14
HERC3-209ENST00000504994 RBBP6Q7Z6E9 1792 aaKnown RBP1.67□□□□□ -2.14
HERC3-209ENST00000504994 ESPL1Q14674 2120 aa1.66□□□□□ -2.14
HERC3-209ENST00000504994 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
HERC3-209ENST00000504994 GNG4P50150 75 aa1.66□□□□□ -2.14
HERC3-209ENST00000504994 Q8N8P6 123 aa1.66□□□□□ -2.14
HERC3-209ENST00000504994 SPTSSBQ8NFR3 76 aa1.66□□□□□ -2.14
HERC3-209ENST00000504994 C12orf57Q99622 126 aa1.66□□□□□ -2.14
HERC3-209ENST00000504994 TEX49A0A1B0GTD5 131 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 APOC4-APOC2K7ER74 178 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 TNFP01375 233 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 APOC2P02655 101 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 CAV3P56539 151 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 TPPP2P59282 170 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 RBM3P98179 157 aaKnown RBP1.65□□□□□ -2.15
HERC3-209ENST00000504994 CATR1Q13166 79 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 INSL4Q14641 139 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 ZNF56Q15929 161 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 MRPL54Q6P161 138 aaKnown RBP1.65□□□□□ -2.15
HERC3-209ENST00000504994 FAM135AQ9P2D6 1515 aa1.65□□□□□ -2.15
HERC3-209ENST00000504994 TRIOBPQ9H2D6 2365 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 MYOM2P54296 1465 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 TRBV30A0A0K0K1B3 111 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
HERC3-209ENST00000504994 PPP3R1P63098 170 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 LINC00575Q6W349 94 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 CYP2G1PQ6ZSU1 146 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 C14orf144Q96I85 54 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 PLXNA1Q9UIW2 1896 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 DAPK1P53355 1430 aa1.64□□□□□ -2.15
HERC3-209ENST00000504994 OOSP1A8MZH6 123 aa1.63□□□□□ -2.15
HERC3-209ENST00000504994 IER3IP1Q9Y5U9 82 aa1.63□□□□□ -2.15
HERC3-209ENST00000504994 ASCC3Q8N3C0 2202 aaKnown RBP1.63□□□□□ -2.15
HERC3-209ENST00000504994 PARP14Q460N5 1801 aa1.62□□□□□ -2.15
HERC3-209ENST00000504994 PHIPQ8WWQ0 1821 aa1.62□□□□□ -2.15
HERC3-209ENST00000504994 C20orf202A1L168 122 aa1.62□□□□□ -2.15
HERC3-209ENST00000504994 FXYD1O00168 92 aa1.62□□□□□ -2.15
HERC3-209ENST00000504994 NRXN2Q9P2S2 1712 aa1.62□□□□□ -2.15
HERC3-209ENST00000504994 COL6A6A6NMZ7 2263 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 ARFGEF1Q9Y6D6 1849 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 BLMP54132 1417 aaPredicted RBP1.61□□□□□ -2.15
HERC3-209ENST00000504994 IFNA17P01571 189 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 C9orf153Q5TBE3 101 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 C12orf73Q69YU5 71 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 C20orf197Q8N268 126 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 DSCR8Q96T75 97 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 TCEAL7Q9BRU2 100 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 ABCA4P78363 2273 aa1.61□□□□□ -2.15
HERC3-209ENST00000504994 A0A1W2PPM0 123 aa1.6□□□□□ -2.15
HERC3-209ENST00000504994 UBE2D1P51668 147 aa1.6□□□□□ -2.15
HERC3-209ENST00000504994 ELOF1P60002 83 aaKnown RBP1.6□□□□□ -2.15
HERC3-209ENST00000504994 IFT140Q96RY7 1462 aa1.6□□□□□ -2.15
HERC3-209ENST00000504994 ROBO1Q9Y6N7 1651 aa1.6□□□□□ -2.15
HERC3-209ENST00000504994 KTN1Q86UP2 1357 aaKnown RBP1.59□□□□□ -2.15
HERC3-209ENST00000504994 MED12Q93074 2177 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 PATJQ8NI35 1801 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 TRBV10-3A0A0K0K1G6 114 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 HCG22E2RYF7 251 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 CCL3L1P16619 93 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 Q8N6K4 173 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 PPP3R2Q96LZ3 170 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 MYH8P13535 1937 aa1.59□□□□□ -2.15
HERC3-209ENST00000504994 SPAG17Q6Q759 2223 aa1.59□□□□□ -2.16
HERC3-209ENST00000504994 PZPP20742 1482 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 ARAP2Q8WZ64 1704 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 CLPSL1A2RUU4 121 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 CCL8P80075 99 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 KLKP1Q107X0 134 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 C10orf99Q6UWK7 81 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 PLAC4Q8WY50 150 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 BET1LQ9NYM9 111 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms