RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 RS1O15537 224 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 PDE6DO43924 150 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 IFNA1P01562 189 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 S100A9P06702 114 aaKnown RBP5.93□□□□□ -1.46
PDGFC-204ENST00000504672 TCL1AP56279 114 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 RPL37AP61513 92 aaKnown RBP5.93□□□□□ -1.46
PDGFC-204ENST00000504672 CYB561D1Q8N8Q1 229 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 BAALCQ8WXS3 180 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 SMIM12Q96EX1 92 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 MLST8Q9BVC4 326 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 AGPAT4-IT1Q9H0P7 198 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 ZNF492Q9P255 531 aa5.93□□□□□ -1.46
PDGFC-204ENST00000504672 LINC00862A6NCI5 91 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 RBFOX3A6NFN3 312 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 F6UZH7 168 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 PEX7O00628 323 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 CSN1S1P47710 185 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 TMEM183BQ1AE95 376 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 ANXA2RQ3ZCQ2 193 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 ZFAND2AQ8N6M9 145 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 VGLL1Q99990 258 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 GNG13Q9P2W3 67 aa5.92□□□□□ -1.46
PDGFC-204ENST00000504672 LTAP01374 205 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 ZNF138P52744 262 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 LINC01556Q5JQF7 62 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 OR10J3Q5JRS4 329 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 Q6AWC8 147 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 NHLRC2Q8NBF2 726 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 CMTM2Q8TAZ6 248 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 TVP23CQ96ET8 276 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 FMC1Q96HJ9 113 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 MRPL18Q9H0U6 180 aaKnown RBP5.91□□□□□ -1.46
PDGFC-204ENST00000504672 ZFP30Q9Y2G7 519 aa5.91□□□□□ -1.46
PDGFC-204ENST00000504672 IGKV2-40A0A087WW87 121 aaPredicted RBP5.9□□□□□ -1.46
PDGFC-204ENST00000504672 IGHV3-16A0A0C4DH30 117 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 C9JCJ5 164 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 K7EQM0 130 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 GAS8-AS1O95177 125 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 IGKV2D-40P01614 121 aaPredicted RBP5.9□□□□□ -1.46
PDGFC-204ENST00000504672 GPX1P07203 203 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 SRP19P09132 144 aaKnown RBP5.9□□□□□ -1.46
PDGFC-204ENST00000504672 UBE2G2P60604 165 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 RAB14P61106 215 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 GNG5P63218 68 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 SAPCD1Q5SSQ6 148 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 PRR9Q5T870 116 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 GOLT1AQ6ZVE7 132 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 TM2D2Q9BX73 214 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 PSG8Q9UQ74 426 aa5.9□□□□□ -1.46
PDGFC-204ENST00000504672 TRBV20OR9-2A0A075B6H5 130 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 IGHV1OR15-1A0A075B7D0 117 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 TRAV8-6A0A0B4J262 113 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 SCO2A0A1W2PP80 73 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 ORM1P02763 201 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 FLI1Q01543 452 aaPredicted RBP5.89□□□□□ -1.47
PDGFC-204ENST00000504672 TDRG1Q3Y452 100 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 MUC21Q5SSG8 566 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 TMEM78Q5T7P6 136 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 CST9LP1Q5W188 147 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 UQCC3Q6UW78 93 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 Q86TA4 180 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 IQCF2Q8IXL9 164 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 TMEM183AQ8IXX5 376 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
PDGFC-204ENST00000504672 TRAV8-1A0A0A6YYK1 113 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 A0A1B0GV50 99 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 C9JQL5 133 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 RPL35P42766 123 aaKnown RBP5.88□□□□□ -1.47
PDGFC-204ENST00000504672 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
PDGFC-204ENST00000504672 ZNF674Q2M3X9 581 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 DNLZQ5SXM8 178 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 IBA57Q5T440 356 aaKnown RBP5.88□□□□□ -1.47
PDGFC-204ENST00000504672 DNAJC30Q96LL9 226 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
PDGFC-204ENST00000504672 CXCL1P09341 107 aa5.87□□□□□ -1.47
PDGFC-204ENST00000504672 AKR1C3P42330 323 aa5.87□□□□□ -1.47
PDGFC-204ENST00000504672 PEA15Q15121 130 aa5.87□□□□□ -1.47
PDGFC-204ENST00000504672 FAM74A3Q4VXF1 159 aa5.87□□□□□ -1.47
PDGFC-204ENST00000504672 C10orf91Q5T1B1 145 aa5.87□□□□□ -1.47
PDGFC-204ENST00000504672 DERL1Q9BUN8 251 aa5.87□□□□□ -1.47
PDGFC-204ENST00000504672 PARLQ9H300 379 aa5.87□□□□□ -1.47
PDGFC-204ENST00000504672 LPAP08519 4548 aa5.86□□□□□ -1.47
PDGFC-204ENST00000504672 C19orf71A6NCJ1 209 aa5.86□□□□□ -1.47
PDGFC-204ENST00000504672 PFN1P07737 140 aaKnown RBP5.86□□□□□ -1.47
PDGFC-204ENST00000504672 CRIP1P50238 77 aa5.86□□□□□ -1.47
PDGFC-204ENST00000504672 TIRAPP58753 221 aa5.86□□□□□ -1.47
PDGFC-204ENST00000504672 DAZ4Q86SG3 579 aaKnown RBP5.86□□□□□ -1.47
PDGFC-204ENST00000504672 OR4C5Q8NGB2 326 aa5.86□□□□□ -1.47
PDGFC-204ENST00000504672 Q8TAT8 98 aa5.86□□□□□ -1.47
PDGFC-204ENST00000504672 DAZ3Q9NR90 486 aaKnown RBP5.86□□□□□ -1.47
PDGFC-204ENST00000504672 TRAV34A0A0B4J273 112 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 TRAV21A0A0B4J279 112 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 GCGP01275 180 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 ZNF80P51504 273 aaPredicted RBP5.85□□□□□ -1.47
PDGFC-204ENST00000504672 SMUG1Q53HV7 270 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 FAM231DQ6ZW35 169 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 BAGE2Q86Y30 109 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 Q8N976 141 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms