RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 LOC100131303A0A0U1RQF7 123 aa9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 PAX4O43316 350 aa9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 NUDT3O95989 172 aa9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 MT-ND4LP03901 98 aa9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 CRYBA4P53673 196 aa9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 NUP35Q8NFH5 326 aa9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 CARHSP1Q9Y2V2 147 aaKnown RBP9.27□□□□□ -0.93
PDLIM7-212ENST00000504380 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 EVI2AP22794 236 aa9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 NDUFAF3Q9BU61 184 aa9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 GFRA4Q9GZZ7 299 aa9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 Q9UF83 564 aa9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
PDLIM7-212ENST00000504380 DNAH1Q9P2D7 4330 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 PPP1R2P9O14990 202 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 APOC3P02656 99 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 MGPP08493 103 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 FAM3BP58499 235 aaPredicted RBP9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 WDR73Q6P4I2 378 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 SLC25A29Q8N8R3 303 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 CLRN3Q8NCR9 226 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 ANAPC16Q96DE5 110 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 CNFNQ9BYD5 112 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 KIF25-AS1Q9Y6Z4 181 aa9.25□□□□□ -0.93
PDLIM7-212ENST00000504380 A0A096LPF7 62 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 A0A1B0GUT8 65 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 P0DMU3 169 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 LINC00315P59091 139 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 ZNF56Q15929 161 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 ZFP2Q6ZN57 461 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 BORCS7Q96B45 105 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 FAM210BQ96KR6 192 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 AP1S3Q96PC3 154 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 NAT8BQ9UHF3 227 aa9.24□□□□□ -0.93
PDLIM7-212ENST00000504380 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
PDLIM7-212ENST00000504380 F5H697 171 aa9.23□□□□□ -0.93
PDLIM7-212ENST00000504380 RHODO00212 210 aa9.23□□□□□ -0.93
PDLIM7-212ENST00000504380 SMIM17P0DL12 118 aa9.23□□□□□ -0.93
PDLIM7-212ENST00000504380 GYPEP15421 78 aa9.23□□□□□ -0.93
PDLIM7-212ENST00000504380 CIDEAO60543 219 aa9.22□□□□□ -0.93
PDLIM7-212ENST00000504380 TRGC1P0CF51 173 aa9.22□□□□□ -0.93
PDLIM7-212ENST00000504380 SLAQ13239 276 aa9.22□□□□□ -0.93
PDLIM7-212ENST00000504380 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
PDLIM7-212ENST00000504380 MRPL54Q6P161 138 aaKnown RBP9.22□□□□□ -0.93
PDLIM7-212ENST00000504380 LYSTQ99698 3801 aa9.22□□□□□ -0.93
PDLIM7-212ENST00000504380 RPS10P5Q9NQ39 176 aa9.22□□□□□ -0.93
PDLIM7-212ENST00000504380 LCE6AA0A183 80 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 TRBV6-4A0A1B0GX49 114 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 GAGE12JA6NER3 117 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 K7EQD1 137 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 GAGE1Q13065 139 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 GAGE4Q13068 117 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 GAGE5Q13069 117 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 RIGQ13278 110 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 GAGE13Q4V321 117 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 PRADC1Q9BSG0 188 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 DPH3P1Q9H4G8 78 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.94
PDLIM7-212ENST00000504380 H3BNG1 76 aa9.2□□□□□ -0.94
PDLIM7-212ENST00000504380 CAMPP49913 170 aa9.2□□□□□ -0.94
PDLIM7-212ENST00000504380 RAB4BP61018 213 aa9.2□□□□□ -0.94
PDLIM7-212ENST00000504380 RHOHQ15669 191 aa9.2□□□□□ -0.94
PDLIM7-212ENST00000504380 SUMO4Q6EEV6 95 aa9.2□□□□□ -0.94
PDLIM7-212ENST00000504380 ATRAIDQ6UW56 229 aa9.2□□□□□ -0.94
PDLIM7-212ENST00000504380 CTDSP1Q9GZU7 261 aa9.2□□□□□ -0.94
PDLIM7-212ENST00000504380 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
PDLIM7-212ENST00000504380 TCTAP57738 103 aa9.19□□□□□ -0.94
PDLIM7-212ENST00000504380 RHEBQ15382 184 aa9.19□□□□□ -0.94
PDLIM7-212ENST00000504380 MRPL23Q16540 153 aaKnown RBP9.19□□□□□ -0.94
PDLIM7-212ENST00000504380 SMIM15Q7Z3B0 74 aa9.19□□□□□ -0.94
PDLIM7-212ENST00000504380 PLECQ15149 4684 aaKnown RBP9.19□□□□□ -0.94
PDLIM7-212ENST00000504380 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 LY6G6CO95867 125 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 SRIP30626 198 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 ESRGQ1W209 222 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 AMN1Q8IY45 258 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 SVBPQ8N300 66 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 ZNRF2Q8NHG8 242 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 RNF185Q96GF1 192 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 URGCP-MRPS24S4R325 110 aa9.18□□□□□ -0.94
PDLIM7-212ENST00000504380 HYDINQ4G0P3 5121 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 A0A087WWC5 75 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 M0QY20 66 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 GAS8-AS1O95177 125 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 SNAPINO95295 136 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 NEXN-AS1Q8NBZ9 246 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
PDLIM7-212ENST00000504380 RAB4AP20338 218 aa9.16□□□□□ -0.94
PDLIM7-212ENST00000504380 HBBP68871 147 aa9.16□□□□□ -0.94
PDLIM7-212ENST00000504380 NEGR1Q7Z3B1 354 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms