RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.42
SF3A1-210ENST00000498259 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 AMTP48728 403 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
SF3A1-210ENST00000498259 FAM74A4Q5TZK3 123 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 ZFP2Q6ZN57 461 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 Q6ZWC4 215 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 POM121L12Q8N7R1 296 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.42
SF3A1-210ENST00000498259 RNF185Q96GF1 192 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 HSPB8Q9UJY1 196 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 AZU1P20160 251 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 ZNF56Q15929 161 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 PDZD11Q5EBL8 140 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 CSNK1G2-AS1Q8NCQ2 148 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 KIR2DL4Q99706 377 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 HIST1H2BLQ99880 126 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 WFDC10AQ9H1F0 79 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 ST20Q9HBF5 79 aa6.14□□□□□ -1.43
SF3A1-210ENST00000498259 TRGV1A0A0A0MS02 117 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 LOC389332A0A1B0GUA5 103 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 TEX48A0A1B0GUV7 120 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 VCYO14598 125 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 SMIM6P0DI80 62 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 IGHV4-30-4P0DP06 118 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 MIFP14174 115 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 SUMO2P61956 95 aaKnown RBP6.13□□□□□ -1.43
SF3A1-210ENST00000498259 RPL32P62910 135 aaKnown RBP6.13□□□□□ -1.43
SF3A1-210ENST00000498259 ORMDL2Q53FV1 153 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 OXLD1Q5BKU9 147 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 Q8N8P6 123 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 OR4C5Q8NGB2 326 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 OR10D4PQ8NGN7 298 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 DNAJC30Q96LL9 226 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 OVOL2Q9BRP0 275 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 EDA2RQ9HAV5 297 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 NIT2Q9NQR4 276 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 KIF25-AS1Q9Y6Z4 181 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 ATRQ13535 2644 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 SORL1Q92673 2214 aa6.13□□□□□ -1.43
SF3A1-210ENST00000498259 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 A0A087WWL8 130 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 TRAV4A0A0B4J268 109 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 C20orf202A1L168 122 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 LEPROTL1O95214 131 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 NPYP01303 97 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 CRYGDP07320 174 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 GIG44P09565 113 aaPredicted RBP6.12□□□□□ -1.43
SF3A1-210ENST00000498259 IFI27P40305 119 aaPredicted RBP6.12□□□□□ -1.43
SF3A1-210ENST00000498259 RIPPLY3P57055 190 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 IQCJQ1A5X6 159 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 TP53TG1Q9Y2A0 90 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 TNFRSF18Q9Y5U5 241 aa6.12□□□□□ -1.43
SF3A1-210ENST00000498259 TRBV10-1A0A0K0K1A3 114 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 TRBV6-5A0A0K0K1A5 114 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 LYRM9A8MSI8 78 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 RS1O15537 224 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 SPRY2O43597 315 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 NCR2O95944 276 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 HBDP02042 147 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 S100A12P80511 92 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 LAGE3Q14657 143 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 CFAP126Q5VTH2 177 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 NRACQ8N912 160 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 NOP10Q9NPE3 64 aaKnown RBP6.11□□□□□ -1.43
SF3A1-210ENST00000498259 AGRNO00468 2067 aa6.11□□□□□ -1.43
SF3A1-210ENST00000498259 MAST4O15021 2626 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 TRAV26-2A0A0B4J265 109 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 LINC01546A6NGU7 62 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 SMKR1H3BMG3 65 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 M0QY20 66 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 ATP5LO75964 103 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 IGHV3-53P01767 116 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 SMAGPQ0VAQ4 97 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 OR11H2Q8NH07 326 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 SPATA3Q8NHX4 192 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 RNF183Q96D59 192 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 C18orf15Q96N68 181 aa6.1□□□□□ -1.43
SF3A1-210ENST00000498259 MRPL16Q9NX20 251 aaKnown RBP6.1□□□□□ -1.43
SF3A1-210ENST00000498259 IGHV1-24A0A0C4DH33 117 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 TRBV27A0A0K0K1C4 114 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 I3L3M4 83 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 SCGB1D1O95968 90 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 NUDT3O95989 172 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 BTF3P20290 206 aaKnown RBP6.09□□□□□ -1.43
SF3A1-210ENST00000498259 FCER1GP30273 86 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 LINC00315P59091 139 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 JOSD1Q15040 202 aaPredicted RBP6.09□□□□□ -1.43
SF3A1-210ENST00000498259 SAMD5Q5TGI4 173 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 PRADC1Q9BSG0 188 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 TMEM70Q9BUB7 260 aa6.09□□□□□ -1.43
SF3A1-210ENST00000498259 FBN1P35555 2871 aaKnown RBP6.08□□□□□ -1.44
SF3A1-210ENST00000498259 TRGV4A0A0C4DH28 118 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 GAGE12BA1L429 117 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 SDHAF1A6NFY7 115 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms