RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 F5H697 171 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 RIGQ13278 110 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 RHEBQ15382 184 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 C14orf178Q8N769 122 aaPredicted RBP8.08□□□□□ -1.12
CTTN-208ENST00000498223 POM121L12Q8N7R1 296 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 NUP35Q8NFH5 326 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 C18orf15Q96N68 181 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 MSRB1Q9NZV6 116 aa8.08□□□□□ -1.12
CTTN-208ENST00000498223 RHODO00212 210 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 CIDEAO60543 219 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 NXPH4O95158 308 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 MGPP08493 103 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 HOXA5P20719 270 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 S100PP25815 95 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
CTTN-208ENST00000498223 SLAQ13239 276 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 ZNF56Q15929 161 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 KCNIP4Q6PIL6 250 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 SAMD10Q9BYL1 202 aa8.07□□□□□ -1.12
CTTN-208ENST00000498223 IGHV4-4A0A075B6R2 117 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 TRAV26-1A0A087WT03 109 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 PAX4O43316 350 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 FOXA3P55318 350 aaPredicted RBP8.06□□□□□ -1.12
CTTN-208ENST00000498223 FHL2Q14192 279 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
CTTN-208ENST00000498223 TMEM88Q6PEY1 159 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 PRO0255Q9UI72 69 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 HHLA3Q9XRX5 114 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 TENM2Q9NT68 2774 aa8.06□□□□□ -1.12
CTTN-208ENST00000498223 A0A087WWC5 75 aa8.05□□□□□ -1.12
CTTN-208ENST00000498223 NUDT3O95989 172 aa8.05□□□□□ -1.12
CTTN-208ENST00000498223 CRYGDP07320 174 aa8.05□□□□□ -1.12
CTTN-208ENST00000498223 EVI2AP22794 236 aa8.05□□□□□ -1.12
CTTN-208ENST00000498223 CAMPP49913 170 aa8.05□□□□□ -1.12
CTTN-208ENST00000498223 ZFP2Q6ZN57 461 aa8.05□□□□□ -1.12
CTTN-208ENST00000498223 LCE6AA0A183 80 aa8.04□□□□□ -1.12
CTTN-208ENST00000498223 GATA1P15976 413 aaPredicted RBP8.04□□□□□ -1.12
CTTN-208ENST00000498223 CRYBA4P53673 196 aa8.04□□□□□ -1.12
CTTN-208ENST00000498223 FAM210BQ96KR6 192 aa8.04□□□□□ -1.12
CTTN-208ENST00000498223 PRADC1Q9BSG0 188 aa8.04□□□□□ -1.12
CTTN-208ENST00000498223 CNFNQ9BYD5 112 aa8.04□□□□□ -1.12
CTTN-208ENST00000498223 DPH3P1Q9H4G8 78 aa8.04□□□□□ -1.12
CTTN-208ENST00000498223 URGCP-MRPS24S4R325 110 aa8.04□□□□□ -1.12
CTTN-208ENST00000498223 S100A8P05109 93 aa8.03□□□□□ -1.12
CTTN-208ENST00000498223 RAB4BP61018 213 aa8.03□□□□□ -1.12
CTTN-208ENST00000498223 C15orf53Q8NAA6 179 aa8.03□□□□□ -1.12
CTTN-208ENST00000498223 BTF3L4Q96K17 158 aa8.03□□□□□ -1.12
CTTN-208ENST00000498223 IMMP2LQ96T52 175 aa8.03□□□□□ -1.12
CTTN-208ENST00000498223 TMEM242Q9NWH2 141 aa8.03□□□□□ -1.12
CTTN-208ENST00000498223 CSMD3Q7Z407 3707 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 RYR2Q92736 4967 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 A0A1B0GW15 77 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 K7EQD1 137 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 GYPEP15421 78 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 HBBP68871 147 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 RHOHQ15669 191 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 SLC25A29Q8N8R3 303 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 ICOSQ9Y6W8 199 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 SACSQ9NZJ4 4579 aa8.02□□□□□ -1.13
CTTN-208ENST00000498223 TRBV6-4A0A1B0GX49 114 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 H7C1H1 209 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 UFSP1Q6NVU6 142 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 Q6ZSN1 163 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 ATP5L2Q7Z4Y8 100 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 VSIG2Q96IQ7 327 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 TMEM191AQ9H0A3 160 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
CTTN-208ENST00000498223 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
CTTN-208ENST00000498223 TRAV9-1A0A075B6T8 112 aa8□□□□□ -1.13
CTTN-208ENST00000498223 LOC100131303A0A0U1RQF7 123 aa8□□□□□ -1.13
CTTN-208ENST00000498223 GAGE12JA6NER3 117 aa8□□□□□ -1.13
CTTN-208ENST00000498223 H3BNG1 76 aa8□□□□□ -1.13
CTTN-208ENST00000498223 SRIP30626 198 aa8□□□□□ -1.13
CTTN-208ENST00000498223 TCTAP57738 103 aa8□□□□□ -1.13
CTTN-208ENST00000498223 GAGE1Q13065 139 aa8□□□□□ -1.13
CTTN-208ENST00000498223 GAGE4Q13068 117 aa8□□□□□ -1.13
CTTN-208ENST00000498223 GAGE5Q13069 117 aa8□□□□□ -1.13
CTTN-208ENST00000498223 MRPL23Q16540 153 aaKnown RBP8□□□□□ -1.13
CTTN-208ENST00000498223 GAGE13Q4V321 117 aa8□□□□□ -1.13
CTTN-208ENST00000498223 ATRAIDQ6UW56 229 aa8□□□□□ -1.13
CTTN-208ENST00000498223 AMN1Q8IY45 258 aa8□□□□□ -1.13
CTTN-208ENST00000498223 DNAH1Q9P2D7 4330 aa8□□□□□ -1.13
CTTN-208ENST00000498223 LYSTQ99698 3801 aa7.99□□□□□ -1.13
CTTN-208ENST00000498223 A0A096LPF7 62 aa7.99□□□□□ -1.13
CTTN-208ENST00000498223 P0DMU3 169 aa7.99□□□□□ -1.13
CTTN-208ENST00000498223 FAM231AP0DMU4 169 aa7.99□□□□□ -1.13
CTTN-208ENST00000498223 FAM231CP0DMU5 169 aa7.99□□□□□ -1.13
CTTN-208ENST00000498223 RPL36AP83881 106 aaKnown RBP7.99□□□□□ -1.13
CTTN-208ENST00000498223 SUMO4Q6EEV6 95 aa7.99□□□□□ -1.13
CTTN-208ENST00000498223 RPL36ALQ969Q0 106 aaKnown RBP7.99□□□□□ -1.13
CTTN-208ENST00000498223 APLNQ9ULZ1 77 aa7.99□□□□□ -1.13
CTTN-208ENST00000498223 TRAV26-2A0A0B4J265 109 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 LINC00315P59091 139 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 RASL11AQ6T310 242 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 NEGR1Q7Z3B1 354 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 ZNRF2Q8NHG8 242 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms