RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
ERCC8-208ENST00000497892 PCNPQ8WW12 178 aaKnown RBP7.76□□□□□ -1.17
ERCC8-208ENST00000497892 UPK3BQ9BT76 320 aa7.76□□□□□ -1.17
ERCC8-208ENST00000497892 MRPS16Q9Y3D3 137 aaKnown RBP7.76□□□□□ -1.17
ERCC8-208ENST00000497892 FRAS1Q86XX4 4008 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 M0R381 172 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 SNAI2O43623 268 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 OR5AL1P0C617 328 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 SRIP30626 198 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 UFSP1Q6NVU6 142 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 NEGR1Q7Z3B1 354 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 SLC25A29Q8N8R3 303 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 EIF5A2Q9GZV4 153 aaKnown RBP7.75□□□□□ -1.17
ERCC8-208ENST00000497892 BIN3Q9NQY0 253 aa7.75□□□□□ -1.17
ERCC8-208ENST00000497892 IGHV3-73A0A0B4J1V6 119 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 LOC100131303A0A0U1RQF7 123 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 RHODO00212 210 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 P01737 135 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 RHOHQ15669 191 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 OR2D3Q8NGH3 330 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 OR10AG1Q8NH19 301 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 DAZAP1Q96EP5 407 aaKnown RBP7.74□□□□□ -1.17
ERCC8-208ENST00000497892 SFRP2Q96HF1 295 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 SAMD10Q9BYL1 202 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 JPT2Q9H910 190 aa7.74□□□□□ -1.17
ERCC8-208ENST00000497892 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
ERCC8-208ENST00000497892 NBDYA0A0U1RRE5 68 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 K7EN84 100 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 M0R2N4 97 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 IGLC6P0CF74 106 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 RPS20P60866 119 aaKnown RBP7.73□□□□□ -1.17
ERCC8-208ENST00000497892 LCE5AQ5TCM9 118 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 LYPD5Q6UWN5 251 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 Q6ZSN1 163 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 OCC1Q8TAD7 63 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 PRADC1Q9BSG0 188 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
ERCC8-208ENST00000497892 DNAH2Q9P225 4427 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 CRYGDP07320 174 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
ERCC8-208ENST00000497892 GZMBP10144 247 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 CEBPGP53567 150 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 FAM74A4Q5TZK3 123 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 SH2D6Q7Z4S9 175 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 Q9H8V8 135 aa7.72□□□□□ -1.17
ERCC8-208ENST00000497892 A0A087WWL8 130 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 XKRY2A2RUG3 117 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 LINC00694P0DN24 101 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 FER1L6-AS1Q8NA97 138 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 NUDT10Q8NFP7 164 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 NUDT11Q96G61 164 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 RNASE7Q9H1E1 156 aaKnown RBP7.71□□□□□ -1.18
ERCC8-208ENST00000497892 RPP21Q9H633 154 aaKnown RBP7.71□□□□□ -1.18
ERCC8-208ENST00000497892 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
ERCC8-208ENST00000497892 MUC21A0A0G2JKD1 596 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 MUC21A0A140T8X8 626 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 ZNF727A8MUV8 499 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 CTRLP40313 264 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 TIRAPP58753 221 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 TTC32Q5I0X7 151 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 C14orf178Q8N769 122 aaPredicted RBP7.7□□□□□ -1.18
ERCC8-208ENST00000497892 TPPP3Q9BW30 176 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 KRTAP1-5Q9BYS1 174 aa7.7□□□□□ -1.18
ERCC8-208ENST00000497892 A0A1W2PPQ1 181 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 F2Z2F3 143 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 RTL8CO15255 209 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 SIVA1O15304 175 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 LINC00336Q6ZUF6 198 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 FAM231DQ6ZW35 169 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 LINC01551Q86U37 167 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 SMDT1Q9H4I9 107 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 HECTD4Q9Y4D8 3996 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
ERCC8-208ENST00000497892 C9JQL5 133 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 CACNG7P62955 275 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 SRSF3P84103 164 aaKnown RBP7.68□□□□□ -1.18
ERCC8-208ENST00000497892 PEA15Q15121 130 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 FAM74A3Q4VXF1 159 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 SOHLH1Q5JUK2 328 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 C1orf134Q5TEV5 83 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 WFDC10BQ8IUB3 73 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 CNFNQ9BYD5 112 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 Q9UF83 564 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
ERCC8-208ENST00000497892 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 RAB4BP61018 213 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 SSTP61278 116 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 GAGE1Q13065 139 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 GAGE4Q13068 117 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 GAGE5Q13069 117 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 ZNF56Q15929 161 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 CT83Q5H943 113 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 LYZL1Q6UWQ5 148 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 C6orf223Q8N319 242 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms