RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 MUC1P15941 1255 aaPredicted RBP2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 CRYGSP22914 178 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 XCL1P47992 114 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 SUPT4H1P63272 117 aaKnown RBP2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 FUT5Q11128 374 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 DEFB121Q5J5C9 76 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 SOSTDC1Q6X4U4 206 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 SIGLECL1Q8N7X8 197 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 ST20-AS1Q8NBB2 130 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 BPIFB6Q8NFQ5 453 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 FDCSPQ8NFU4 85 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 YPEL2Q96QA6 119 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 IMMP2LQ96T52 175 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 NPCDR1Q9BY65 106 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 BANF2Q9H503 90 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 SCN3BQ9NY72 215 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 ANAPC1Q9H1A4 1944 aa2.24□□□□□ -2.05
EXOSC3-208ENST00000496910 NCKAP5O14513 1909 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 IGLV4-69A0A075B6H9 119 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 A0A1W2PQD3 144 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 C20orf202A1L168 122 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 NDUFB3O43676 98 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 IGKV3-15P01624 115 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 IGHV3-53P01767 116 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 IGLV7-43P04211 117 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 IFNA4P05014 189 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 S100A8P05109 93 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 SLC25A5P05141 298 aaKnown RBP2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 DNAH10OSP0CZ25 163 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 RPL35P42766 123 aaKnown RBP2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 RPL28P46779 137 aaKnown RBP2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 HES1Q14469 280 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 HSD17B12Q53GQ0 312 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 PATE2Q6UY27 113 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 Q6ZQT7 251 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 RPRMLQ8N4K4 120 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 TCTEX1D1Q8N7M0 179 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 Q8NDZ9 215 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 OR10P1Q8NGE3 313 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 OR5A2Q8NGI9 324 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 PPP3R2Q96LZ3 170 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 SCGB3A1Q96QR1 104 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 SDF2Q99470 211 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 PDCD10Q9BUL8 212 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 CST9LQ9H4G1 147 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 MYH6P13533 1939 aa2.23□□□□□ -2.05
EXOSC3-208ENST00000496910 A0A0J9YW62 118 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 A8MU10 97 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 K7EIL1 84 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 HIST1H2BKO60814 126 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 NCR2O95944 276 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 HIST1H2BJP06899 126 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 CISD3P0C7P0 127 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 DEFA4P12838 97 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 FGF7P21781 194 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 EIF2B2P49770 351 aaKnown RBP2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 AKR1D1P51857 326 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 MRPS10P82664 201 aaKnown RBP2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 QRFPP83859 136 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 C7orf65Q6ZTY9 151 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 MMGT1Q8N4V1 131 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 KLF14Q8TD94 323 aaPredicted RBP2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 MIEN1Q9BRT3 115 aa2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 MYO5AQ9Y4I1 1855 aaKnown RBP2.22□□□□□ -2.05
EXOSC3-208ENST00000496910 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.05
EXOSC3-208ENST00000496910 PKD1P98161 4303 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 TRGV10A0A0A0MS01 117 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 CCL4P13236 92 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 ZNF22P17026 224 aaPredicted RBP2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 CD24P25063 80 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 AQP4P55087 323 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 DYNLT1P63172 113 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 ZNF117Q03924 483 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 EIF5AL1Q6IS14 154 aaKnown RBP2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 NOXRED1Q6NXP6 359 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 Q6ZS92 163 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 LYPD6Q86Y78 171 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 SNX29P2Q8IUI4 249 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 DYNAPQ8N1N2 210 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 Q8NAQ8 132 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 MORN4Q8NDC4 146 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 OR5H6Q8NGV6 325 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 PRELID3AQ96N28 172 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 ZNF714Q96N38 554 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 GINS4Q9BRT9 223 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 DNAH2Q9P225 4427 aa2.21□□□□□ -2.06
EXOSC3-208ENST00000496910 TANC2Q9HCD6 1990 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 TRAV27A0A087WT01 109 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 A8MWV9 139 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 M0R129 80 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 RER1O15258 196 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 IGLV3-19P01714 112 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 STATHP02808 62 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 SHBGP04278 402 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 APODP05090 189 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 MSMBP08118 114 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 GZMBP10144 247 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 CRYGAP11844 174 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms