RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 HTTP42858 3142 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 PLXNA4Q9HCM2 1894 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 DOPEY1Q5JWR5 2465 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 ERICH3Q5RHP9 1530 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.26□□□□□ -2.05
SNX13-211ENST00000496855 UGGT1Q9NYU2 1555 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 KIDINS220Q9ULH0 1771 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 FBN3Q75N90 2809 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 C10orf71Q711Q0 1435 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 ITPR3Q14573 2671 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 MPDZO75970 2070 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 REV3LO60673 3130 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 CCDC88BA6NC98 1476 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 TRAV30A0A087WSZ9 112 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 OOSP1A8MZH6 123 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 CXCL8P10145 99 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 C1orf137Q5JT78 98 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 NOP16Q9Y3C1 178 aaKnown RBP2.26□□□□□ -2.05
SNX13-211ENST00000496855 SERP1Q9Y6X1 66 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 MYLKQ15746 1914 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 AKAP11Q9UKA4 1901 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 MYO18BQ8IUG5 2567 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 MYH9P35579 1960 aaKnown RBP2.25□□□□□ -2.05
SNX13-211ENST00000496855 COL11A1P12107 1806 aaPredicted RBP2.25□□□□□ -2.05
SNX13-211ENST00000496855 NKTRP30414 1462 aaKnown RBP2.25□□□□□ -2.05
SNX13-211ENST00000496855 EML5Q05BV3 1969 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 RGPD3A6NKT7 1758 aaPredicted RBP2.25□□□□□ -2.05
SNX13-211ENST00000496855 RGPD4Q7Z3J3 1758 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 TOP2AP11388 1531 aaKnown RBP2.25□□□□□ -2.05
SNX13-211ENST00000496855 NEXMIFQ5QGS0 1516 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 KCPQ6ZWJ8 1503 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 GEMIN2O14893 280 aaKnown RBP2.25□□□□□ -2.05
SNX13-211ENST00000496855 CASC2Q6XLA1 102 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 SLC25A26Q70HW3 274 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 ACBD7Q8N6N7 88 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 NAA60Q9H7X0 242 aa2.25□□□□□ -2.05
SNX13-211ENST00000496855 IGKV2-24A0A0C4DH68 120 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 MCRIP1C9JLW8 97 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 YPEL1O60688 119 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 MPC2O95563 127 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 PRB4P10163 310 aaPredicted RBP2.24□□□□□ -2.05
SNX13-211ENST00000496855 Q56UQ5 140 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 SMIM7Q9BQ49 75 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 RPRMQ9NS64 109 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 NRXN3Q9Y4C0 1643 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 PKD1L3Q7Z443 1732 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 FAM208BQ5VWN6 2430 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 SCAPERQ9BY12 1400 aa2.24□□□□□ -2.05
SNX13-211ENST00000496855 TRPM7Q96QT4 1865 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 USP24Q9UPU5 2620 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 TOPAZ1Q8N9V7 1692 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 J3QLW9 94 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 M0R143 59 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 ADCYAP1P18509 176 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 ELOBQ15370 118 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 HCP5Q6MZN7 132 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 MRPL54Q6P161 138 aaKnown RBP2.23□□□□□ -2.05
SNX13-211ENST00000496855 C8orf59Q8N0T1 100 aaPredicted RBP2.23□□□□□ -2.05
SNX13-211ENST00000496855 DEFB123Q8N688 67 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 C5orf17Q8NAS9 161 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 VSTM2AQ8TAG5 236 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 C10orf105Q8TEF2 133 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 TTTY12Q9BZ98 90 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 ABCA12Q86UK0 2595 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 BAZ2BQ9UIF8 2168 aaKnown RBP2.23□□□□□ -2.05
SNX13-211ENST00000496855 TPRP12270 2363 aaKnown RBP2.23□□□□□ -2.05
SNX13-211ENST00000496855 ARHGAP35Q9NRY4 1499 aa2.23□□□□□ -2.05
SNX13-211ENST00000496855 SPEGQ15772 3267 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 LAMB2P55268 1798 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 COL5A1P20908 1838 aaPredicted RBP2.22□□□□□ -2.05
SNX13-211ENST00000496855 H3BRN7 92 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 IFNA17P01571 189 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 PKIAP61925 76 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 Q6AWC8 147 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 GTF2H5Q6ZYL4 71 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 LINC00526Q96FQ7 95 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 DSCR8Q96T75 97 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 SNHG12Q9BXW3 62 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 CITO14578 2027 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 BRWD1Q9NSI6 2320 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 LRRC37A3O60309 1634 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 PLCH1Q4KWH8 1693 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 KALRNO60229 2985 aa2.22□□□□□ -2.05
SNX13-211ENST00000496855 DOCK10Q96BY6 2186 aa2.21□□□□□ -2.05
SNX13-211ENST00000496855 XIRP2A4UGR9 3374 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 PIRTP0C851 137 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 RNASE3P12724 160 aaKnown RBP2.21□□□□□ -2.06
SNX13-211ENST00000496855 GNG2P59768 71 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 OR2T2Q6IF00 324 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.21□□□□□ -2.06
SNX13-211ENST00000496855 PLPP5Q8NEB5 264 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 TMEM242Q9NWH2 141 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 ZNF609O15014 1411 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 HEATR1Q9H583 2144 aaKnown RBP2.21□□□□□ -2.06
SNX13-211ENST00000496855 NCOR1O75376 2440 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 ASPMQ8IZT6 3477 aa2.21□□□□□ -2.06
SNX13-211ENST00000496855 TRGV4A0A0C4DH28 118 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 MCM3APO60318 1980 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 TFF1P04155 84 aa2.2□□□□□ -2.06
SNX13-211ENST00000496855 SPINK8P0C7L1 97 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms