RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 CFHR3Q02985 330 aa9.25□□□□□ -0.93
PDE6B-212ENST00000496514 TCTEX1D4Q5JR98 221 aa9.25□□□□□ -0.93
PDE6B-212ENST00000496514 LINC00477Q96M19 166 aa9.25□□□□□ -0.93
PDE6B-212ENST00000496514 GAGE5Q13069 117 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 GAGE6Q13070 117 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 SPXQ9BT56 116 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 MS4A6AQ9H2W1 248 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 MRPL16Q9NX20 251 aaKnown RBP9.24□□□□□ -0.93
PDE6B-212ENST00000496514 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 SLC25A16P16260 332 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 ADAMTSL5Q6ZMM2 481 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 TMEM8BA6NDV4 472 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 ASIPP42127 132 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 GTSCR1Q86UQ5 136 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 TMEM160Q9NX00 188 aa9.24□□□□□ -0.93
PDE6B-212ENST00000496514 J3QR89 54 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 K7EP34 96 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 CD7P09564 240 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 NRACQ8N912 160 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 IGKV2D-26A0A0A0MRZ7 120 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 OR11H12B2RN74 326 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 UFSP1Q6NVU6 142 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 OR11H1Q8NG94 326 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 OR11H2Q8NH07 326 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
PDE6B-212ENST00000496514 A0A1W2PRX2 142 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 OVOL1O14753 267 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 SMIM17P0DL12 118 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 RNASE3P12724 160 aaKnown RBP9.22□□□□□ -0.93
PDE6B-212ENST00000496514 C3orf56Q8N813 242 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 F5H697 171 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 HOXD3P31249 432 aaPredicted RBP9.22□□□□□ -0.93
PDE6B-212ENST00000496514 ETDBQ3ZM63 59 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 ZC2HC1BQ5TFG8 222 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
PDE6B-212ENST00000496514 EMP1P54849 157 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 PPDPFQ9H3Y8 114 aa9.22□□□□□ -0.93
PDE6B-212ENST00000496514 KNCNA6PVL3 124 aa9.21□□□□□ -0.93
PDE6B-212ENST00000496514 MDFICQ9P1T7 246 aa9.21□□□□□ -0.93
PDE6B-212ENST00000496514 VPREB3Q9UKI3 123 aa9.21□□□□□ -0.93
PDE6B-212ENST00000496514 ZNF702PQ9H963 129 aa9.21□□□□□ -0.94
PDE6B-212ENST00000496514 FCER1GP30273 86 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 FAM159AQ6UWV7 190 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 RASL10AQ92737 203 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 VCX2Q9H322 139 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 IGLV2-18A0A075B6J9 118 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 IGHV3-73A0A0B4J1V6 119 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 COX8AP10176 69 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 INSL3P51460 131 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 MRPL35Q9NZE8 188 aaKnown RBP9.2□□□□□ -0.94
PDE6B-212ENST00000496514 FN1P02751 2386 aaKnown RBP9.2□□□□□ -0.94
PDE6B-212ENST00000496514 H3BUA1 57 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 WFDC2Q14508 124 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 DEFB113Q30KQ7 82 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 Q8N8P6 123 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 C1QTNF4Q9BXJ3 329 aa9.2□□□□□ -0.94
PDE6B-212ENST00000496514 NXT2Q9NPJ8 142 aaKnown RBP9.2□□□□□ -0.94
PDE6B-212ENST00000496514 DSCR9P59020 149 aa9.19□□□□□ -0.94
PDE6B-212ENST00000496514 SRSF2Q01130 221 aaKnown RBP9.19□□□□□ -0.94
PDE6B-212ENST00000496514 LGALS9BQ3B8N2 356 aa9.19□□□□□ -0.94
PDE6B-212ENST00000496514 LGALS9CQ6DKI2 356 aa9.19□□□□□ -0.94
PDE6B-212ENST00000496514 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
PDE6B-212ENST00000496514 MT-ATP8P03928 68 aa9.18□□□□□ -0.94
PDE6B-212ENST00000496514 LAGE3Q14657 143 aa9.18□□□□□ -0.94
PDE6B-212ENST00000496514 SPAG8Q99932 426 aaPredicted RBP9.18□□□□□ -0.94
PDE6B-212ENST00000496514 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
PDE6B-212ENST00000496514 FGF6P10767 208 aa9.18□□□□□ -0.94
PDE6B-212ENST00000496514 FABP2P12104 132 aa9.18□□□□□ -0.94
PDE6B-212ENST00000496514 Q6YL49 198 aa9.18□□□□□ -0.94
PDE6B-212ENST00000496514 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
PDE6B-212ENST00000496514 ZNF418Q8TF45 676 aaPredicted RBP9.17□□□□□ -0.94
PDE6B-212ENST00000496514 TMEM97Q5BJF2 176 aa9.17□□□□□ -0.94
PDE6B-212ENST00000496514 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
PDE6B-212ENST00000496514 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
PDE6B-212ENST00000496514 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
PDE6B-212ENST00000496514 ZNF256Q9Y2P7 627 aaPredicted RBP9.17□□□□□ -0.94
PDE6B-212ENST00000496514 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
PDE6B-212ENST00000496514 MYOZ3Q8TDC0 251 aa9.16□□□□□ -0.94
PDE6B-212ENST00000496514 DEFB131AP59861 70 aa9.16□□□□□ -0.94
PDE6B-212ENST00000496514 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
PDE6B-212ENST00000496514 Q8N1Y9 231 aa9.16□□□□□ -0.94
PDE6B-212ENST00000496514 LGALS1P09382 135 aaKnown RBP9.16□□□□□ -0.94
PDE6B-212ENST00000496514 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
PDE6B-212ENST00000496514 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
PDE6B-212ENST00000496514 HIVEP2P31629 2446 aa9.15□□□□□ -0.94
PDE6B-212ENST00000496514 IGKCP01834 107 aa9.15□□□□□ -0.94
PDE6B-212ENST00000496514 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.94
PDE6B-212ENST00000496514 UNC79Q9P2D8 2635 aa9.15□□□□□ -0.94
PDE6B-212ENST00000496514 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
PDE6B-212ENST00000496514 SETXQ7Z333 2677 aaKnown RBP9.15□□□□□ -0.95
PDE6B-212ENST00000496514 A0A0J9YX75 114 aa9.14□□□□□ -0.95
PDE6B-212ENST00000496514 A6NDN8 102 aa9.14□□□□□ -0.95
PDE6B-212ENST00000496514 ZNF56Q15929 161 aa9.14□□□□□ -0.95
PDE6B-212ENST00000496514 SYT8Q8NBV8 401 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms