RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 PPP1R17O96001 155 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 FXYD2P54710 66 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 C2orf66Q6UXQ4 117 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 MXRA5Q9NR99 2828 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 DUX5Q96PT3 197 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 JPT2Q9H910 190 aa11.14□□□□□ -0.63
UBXN11-216ENST00000496466 CD7P09564 240 aa11.13□□□□□ -0.63
UBXN11-216ENST00000496466 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
UBXN11-216ENST00000496466 TEX15Q9BXT5 2789 aa11.13□□□□□ -0.63
UBXN11-216ENST00000496466 CREBBPQ92793 2442 aa11.13□□□□□ -0.63
UBXN11-216ENST00000496466 IGHV4OR15-8A0A075B7B6 117 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 A0A087WW49 117 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 APCP25054 2843 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 A0A0J9YX75 114 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 A0A1W2PPM0 123 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 HIST2H2BCQ6DN03 193 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 CEND1Q8N111 149 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 ODF3Q96PU9 254 aa11.12□□□□□ -0.63
UBXN11-216ENST00000496466 PRRC2AP48634 2157 aaKnown RBP11.11□□□□□ -0.63
UBXN11-216ENST00000496466 K7EQG2 157 aa11.11□□□□□ -0.63
UBXN11-216ENST00000496466 RPL32P62910 135 aaKnown RBP11.11□□□□□ -0.63
UBXN11-216ENST00000496466 TM2D2Q9BX73 214 aa11.11□□□□□ -0.63
UBXN11-216ENST00000496466 IGKV3-20P01619 116 aa11.1□□□□□ -0.63
UBXN11-216ENST00000496466 SYNJ2BPP57105 145 aa11.1□□□□□ -0.63
UBXN11-216ENST00000496466 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
UBXN11-216ENST00000496466 SPCS1Q9Y6A9 102 aa11.1□□□□□ -0.63
UBXN11-216ENST00000496466 A0A087WWL8 130 aa11.1□□□□□ -0.63
UBXN11-216ENST00000496466 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
UBXN11-216ENST00000496466 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
UBXN11-216ENST00000496466 IGHV3-16A0A0C4DH30 117 aa11.09□□□□□ -0.63
UBXN11-216ENST00000496466 A0A1B0GV72 72 aa11.09□□□□□ -0.63
UBXN11-216ENST00000496466 ELANEP08246 267 aa11.09□□□□□ -0.63
UBXN11-216ENST00000496466 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
UBXN11-216ENST00000496466 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
UBXN11-216ENST00000496466 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
UBXN11-216ENST00000496466 CHD6Q8TD26 2715 aa11.09□□□□□ -0.63
UBXN11-216ENST00000496466 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
UBXN11-216ENST00000496466 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
UBXN11-216ENST00000496466 K7ERJ3 54 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 AZU1P20160 251 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 TAL2Q16559 108 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 SIGMAR1Q99720 223 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 MDFICQ9P1T7 246 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 NBPF19A0A087WUL8 3843 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 F5H697 171 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 LGALS9O00182 355 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 SAMD5Q5TGI4 173 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 ZFP2Q6ZN57 461 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 WFDC11Q8NEX6 87 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 CYSLTR1Q9Y271 337 aa11.08□□□□□ -0.64
UBXN11-216ENST00000496466 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 FABP2P12104 132 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
UBXN11-216ENST00000496466 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 VCYO14598 125 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 TSHBP01222 138 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 CRYGDP07320 174 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 HOXD3P31249 432 aaPredicted RBP11.07□□□□□ -0.64
UBXN11-216ENST00000496466 DEFB104AQ8WTQ1 72 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 TENM4Q6N022 2769 aa11.07□□□□□ -0.64
UBXN11-216ENST00000496466 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
UBXN11-216ENST00000496466 IGHV1OR15-1A0A075B7D0 117 aa11.06□□□□□ -0.64
UBXN11-216ENST00000496466 SPINK13Q1W4C9 94 aa11.06□□□□□ -0.64
UBXN11-216ENST00000496466 Q8N1Y9 231 aa11.06□□□□□ -0.64
UBXN11-216ENST00000496466 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
UBXN11-216ENST00000496466 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
UBXN11-216ENST00000496466 E9PLD3 99 aa11.06□□□□□ -0.64
UBXN11-216ENST00000496466 TLN2Q9Y4G6 2542 aa11.05□□□□□ -0.64
UBXN11-216ENST00000496466 SDHAF1A6NFY7 115 aa11.05□□□□□ -0.64
UBXN11-216ENST00000496466 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
UBXN11-216ENST00000496466 FAM74A4Q5TZK3 123 aa11.05□□□□□ -0.64
UBXN11-216ENST00000496466 RNF152Q8N8N0 203 aa11.05□□□□□ -0.64
UBXN11-216ENST00000496466 HIST1H4GQ99525 98 aa11.05□□□□□ -0.64
UBXN11-216ENST00000496466 AGRNO00468 2067 aa11.05□□□□□ -0.64
UBXN11-216ENST00000496466 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 TRBV6-5A0A0K0K1A5 114 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 LINC01619G3V211 115 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 SYT8Q8NBV8 401 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 KIR2DL4Q99706 377 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 PRADC1Q9BSG0 188 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 ITPR3Q14573 2671 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 TRBV27A0A0K0K1C4 114 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 LINC01549A6NIU2 74 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 RPL39P62891 51 aaKnown RBP11.04□□□□□ -0.64
UBXN11-216ENST00000496466 CD300EQ496F6 205 aaPredicted RBP11.04□□□□□ -0.64
UBXN11-216ENST00000496466 Q8N2B8 174 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 GTSF1LQ9H1H1 148 aa11.04□□□□□ -0.64
UBXN11-216ENST00000496466 RPL24P83731 157 aaKnown RBP11.03□□□□□ -0.64
UBXN11-216ENST00000496466 HIST2H2BDQ6DRA6 164 aa11.03□□□□□ -0.64
UBXN11-216ENST00000496466 MORN3Q6PF18 240 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms