RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 RIPPLY3P57055 190 aa17.62■□□□□ 0.41
PPP1R3F-205ENST00000495799 DAZ2Q13117 558 aaKnown RBP17.62■□□□□ 0.41
PPP1R3F-205ENST00000495799 STAB1Q9NY15 2570 aa17.61■□□□□ 0.41
PPP1R3F-205ENST00000495799 SMKR1H3BMG3 65 aa17.61■□□□□ 0.41
PPP1R3F-205ENST00000495799 LGALS9BQ3B8N2 356 aa17.61■□□□□ 0.41
PPP1R3F-205ENST00000495799 TRRAPQ9Y4A5 3859 aa17.6■□□□□ 0.41
PPP1R3F-205ENST00000495799 RASL10AQ92737 203 aa17.6■□□□□ 0.41
PPP1R3F-205ENST00000495799 MAP1LC3AQ9H492 121 aa17.6■□□□□ 0.41
PPP1R3F-205ENST00000495799 JPT2Q9H910 190 aa17.6■□□□□ 0.41
PPP1R3F-205ENST00000495799 A0A087WWL8 130 aa17.59■□□□□ 0.41
PPP1R3F-205ENST00000495799 PDZD11Q5EBL8 140 aa17.59■□□□□ 0.41
PPP1R3F-205ENST00000495799 FAM74A4Q5TZK3 123 aa17.59■□□□□ 0.41
PPP1R3F-205ENST00000495799 CHCHD1Q96BP2 118 aaKnown RBP17.59■□□□□ 0.41
PPP1R3F-205ENST00000495799 RHODO00212 210 aa17.58■□□□□ 0.41
PPP1R3F-205ENST00000495799 TNFRSF6BO95407 300 aa17.58■□□□□ 0.41
PPP1R3F-205ENST00000495799 NPYP01303 97 aa17.58■□□□□ 0.41
PPP1R3F-205ENST00000495799 CRYGDP07320 174 aa17.58■□□□□ 0.41
PPP1R3F-205ENST00000495799 Q6ZWC4 215 aa17.58■□□□□ 0.41
PPP1R3F-205ENST00000495799 TMEM18Q96B42 140 aa17.58■□□□□ 0.41
PPP1R3F-205ENST00000495799 MRPL16Q9NX20 251 aaKnown RBP17.58■□□□□ 0.41
PPP1R3F-205ENST00000495799 COL6A5A8TX70 2615 aa17.58■□□□□ 0.4
PPP1R3F-205ENST00000495799 F5H697 171 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 LINC00315P59091 139 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 ZNF56Q15929 161 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 NIT1Q86X76 327 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 PRSS3P2Q8NHM4 247 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 TRGV1A0A0A0MS02 117 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 TRAV26-2A0A0B4J265 109 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 DEFB135Q30KP9 77 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 RNASEKQ6P5S7 137 aaKnown RBP17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 OVOL2Q9BRP0 275 aa17.57■□□□□ 0.4
PPP1R3F-205ENST00000495799 HSBP1O75506 76 aa17.56■□□□□ 0.4
PPP1R3F-205ENST00000495799 LINC00614P0C842 121 aa17.56■□□□□ 0.4
PPP1R3F-205ENST00000495799 LINC00310P59036 64 aa17.56■□□□□ 0.4
PPP1R3F-205ENST00000495799 FA2HQ7L5A8 372 aa17.56■□□□□ 0.4
PPP1R3F-205ENST00000495799 SAMD10Q9BYL1 202 aa17.56■□□□□ 0.4
PPP1R3F-205ENST00000495799 PLAC8L1A1L4L8 177 aa17.55■□□□□ 0.4
PPP1R3F-205ENST00000495799 RS1O15537 224 aa17.55■□□□□ 0.4
PPP1R3F-205ENST00000495799 SUMO4Q6EEV6 95 aa17.55■□□□□ 0.4
PPP1R3F-205ENST00000495799 NRACQ8N912 160 aa17.55■□□□□ 0.4
PPP1R3F-205ENST00000495799 NOP10Q9NPE3 64 aaKnown RBP17.55■□□□□ 0.4
PPP1R3F-205ENST00000495799 X6R8D5 127 aa17.55■□□□□ 0.4
PPP1R3F-205ENST00000495799 CFAP126Q5VTH2 177 aa17.54■□□□□ 0.4
PPP1R3F-205ENST00000495799 LOC389332A0A1B0GUA5 103 aa17.53■□□□□ 0.4
PPP1R3F-205ENST00000495799 H7C1H1 209 aa17.53■□□□□ 0.4
PPP1R3F-205ENST00000495799 NUPR1O60356 82 aa17.53■□□□□ 0.4
PPP1R3F-205ENST00000495799 RNF183Q96D59 192 aa17.53■□□□□ 0.4
PPP1R3F-205ENST00000495799 C20orf78Q9BR46 151 aa17.53■□□□□ 0.4
PPP1R3F-205ENST00000495799 NXT2Q9NPJ8 142 aaKnown RBP17.53■□□□□ 0.4
PPP1R3F-205ENST00000495799 PRSS47A8MTI9 375 aa17.52■□□□□ 0.4
PPP1R3F-205ENST00000495799 GATA1P15976 413 aaPredicted RBP17.52■□□□□ 0.4
PPP1R3F-205ENST00000495799 PMCHP20382 165 aa17.52■□□□□ 0.4
PPP1R3F-205ENST00000495799 ZFP2Q6ZN57 461 aa17.52■□□□□ 0.4
PPP1R3F-205ENST00000495799 PACRGQ96M98 296 aaPredicted RBP17.52■□□□□ 0.4
PPP1R3F-205ENST00000495799 HIST1H2BLQ99880 126 aa17.52■□□□□ 0.4
PPP1R3F-205ENST00000495799 ANK2Q01484 3957 aa17.52■□□□□ 0.4
PPP1R3F-205ENST00000495799 FABP4P15090 132 aa17.52■□□□□ 0.39
PPP1R3F-205ENST00000495799 AKR1D1P51857 326 aa17.52■□□□□ 0.39
PPP1R3F-205ENST00000495799 OR11H2Q8NH07 326 aa17.52■□□□□ 0.39
PPP1R3F-205ENST00000495799 EDA2RQ9HAV5 297 aa17.52■□□□□ 0.39
PPP1R3F-205ENST00000495799 AP5S1Q9NUS5 200 aa17.52■□□□□ 0.39
PPP1R3F-205ENST00000495799 TRAV4A0A0B4J268 109 aa17.51■□□□□ 0.39
PPP1R3F-205ENST00000495799 CIDEAO60543 219 aa17.51■□□□□ 0.39
PPP1R3F-205ENST00000495799 GAS8-AS1O95177 125 aa17.51■□□□□ 0.39
PPP1R3F-205ENST00000495799 MIFP14174 115 aa17.51■□□□□ 0.39
PPP1R3F-205ENST00000495799 IFI27P40305 119 aaPredicted RBP17.51■□□□□ 0.39
PPP1R3F-205ENST00000495799 Q6ZTI0 123 aa17.51■□□□□ 0.39
PPP1R3F-205ENST00000495799 OR4C5Q8NGB2 326 aa17.51■□□□□ 0.39
PPP1R3F-205ENST00000495799 IFITM10A6NMD0 228 aa17.5■□□□□ 0.39
PPP1R3F-205ENST00000495799 AMTP48728 403 aa17.5■□□□□ 0.39
PPP1R3F-205ENST00000495799 KPRPQ5T749 579 aaPredicted RBP17.5■□□□□ 0.39
PPP1R3F-205ENST00000495799 UFSP1Q6NVU6 142 aa17.5■□□□□ 0.39
PPP1R3F-205ENST00000495799 URB1-AS1Q96HZ7 61 aa17.5■□□□□ 0.39
PPP1R3F-205ENST00000495799 TP53TG1Q9Y2A0 90 aa17.5■□□□□ 0.39
PPP1R3F-205ENST00000495799 CMYA5Q8N3K9 4069 aa17.5■□□□□ 0.39
PPP1R3F-205ENST00000495799 SUMO2P61956 95 aaKnown RBP17.49■□□□□ 0.39
PPP1R3F-205ENST00000495799 Q8N8P6 123 aa17.48■□□□□ 0.39
PPP1R3F-205ENST00000495799 ST20Q9HBF5 79 aa17.48■□□□□ 0.39
PPP1R3F-205ENST00000495799 TRGV2A0A075B6R0 118 aa17.47■□□□□ 0.39
PPP1R3F-205ENST00000495799 RPL39LQ96EH5 51 aaKnown RBP17.47■□□□□ 0.39
PPP1R3F-205ENST00000495799 M0QY20 66 aa17.47■□□□□ 0.39
PPP1R3F-205ENST00000495799 EMP1P54849 157 aa17.47■□□□□ 0.39
PPP1R3F-205ENST00000495799 SMIM2Q9BVW6 85 aa17.47■□□□□ 0.39
PPP1R3F-205ENST00000495799 IGHV3-73A0A0B4J1V6 119 aa17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 TRBV6-5A0A0K0K1A5 114 aa17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 GAGE12BA1L429 117 aa17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 GAGE7O76087 117 aa17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 GAGE12FP0CL80 117 aa17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 GAGE12GP0CL81 117 aa17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 GAGE12IP0CL82 117 aa17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 RPL32P62910 135 aaKnown RBP17.46■□□□□ 0.39
PPP1R3F-205ENST00000495799 LYRM9A8MSI8 78 aa17.45■□□□□ 0.38
PPP1R3F-205ENST00000495799 OR10D4PQ8NGN7 298 aa17.45■□□□□ 0.38
PPP1R3F-205ENST00000495799 NIT2Q9NQR4 276 aa17.45■□□□□ 0.38
PPP1R3F-205ENST00000495799 LINC01546A6NGU7 62 aa17.44■□□□□ 0.38
PPP1R3F-205ENST00000495799 K7EMI3 77 aa17.44■□□□□ 0.38
PPP1R3F-205ENST00000495799 IGHV3-53P01767 116 aa17.44■□□□□ 0.38
PPP1R3F-205ENST00000495799 IGHV4-28A0A0C4DH34 117 aa17.43■□□□□ 0.38
PPP1R3F-205ENST00000495799 FAM19A2Q8N3H0 131 aa17.43■□□□□ 0.38
PPP1R3F-205ENST00000495799 IGLV2-18A0A075B6J9 118 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms