RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 ZNF784Q8NCA9 323 aaPredicted RBP3.56□□□□□ -1.84
PRKD3-210ENST00000494667 VSIG2Q96IQ7 327 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 PDE4DIPQ5VU43 2346 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 CLPSL1A2RUU4 121 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 IGHV3-30-3P0DP02 117 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 CLEC2BQ92478 149 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 BRCA2P51587 3418 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 CHD7Q9P2D1 2997 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 PF4P02776 101 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 PI4KAP42356 2102 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 TIRAPP58753 221 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 HRCT1Q6UXD1 115 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 FAM104AQ969W3 186 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 SZT2Q5T011 3432 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 NDUFA1O15239 70 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 RS1O15537 224 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 SPRY3O43610 288 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 NDUFB3O43676 98 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 RNASE3P12724 160 aaKnown RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 C9orf139Q6ZV77 190 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 Q8N6K4 173 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 MBD3L2Q8NHZ7 208 aaPredicted RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 UBE2D4Q9Y2X8 147 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 MYO7AQ13402 2215 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 DAZ2Q13117 558 aaKnown RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 ADAMTSL4-AS1Q5T5F5 129 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 DAZ4Q86SG3 579 aaKnown RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 RNF152Q8N8N0 203 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 C20orf203Q8NBC4 194 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 FAM110DQ8TAY7 271 aaPredicted RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 KLK15Q9H2R5 256 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 DAZ1Q9NQZ3 744 aaKnown RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 DAZ3Q9NR90 486 aaKnown RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 IGLV4-3A0A075B6K6 122 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 PFN2P35080 140 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 ATP5EP56381 51 aaPredicted RBP3.55□□□□□ -1.84
PRKD3-210ENST00000494667 PRR9Q5T870 116 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 LINC01561Q8N1V8 128 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 C9orf106Q8NAJ2 232 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 PRSS33Q8NF86 280 aa3.55□□□□□ -1.84
PRKD3-210ENST00000494667 SOCS3O14543 225 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 NPC2P61916 151 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 DOCK7Q96N67 2140 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 F5P12259 2224 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 SUMO4Q6EEV6 95 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 RNF182Q8N6D2 247 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 USP17L23D6RBM5 183 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 IGFL2Q6UWQ7 119 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 C1orf158Q8N1D5 194 aa3.54□□□□□ -1.84
PRKD3-210ENST00000494667 ENSAO43768 121 aaKnown RBP3.53□□□□□ -1.84
PRKD3-210ENST00000494667 RPL28P46779 137 aaKnown RBP3.53□□□□□ -1.84
PRKD3-210ENST00000494667 LY6G5BQ8NDX9 201 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 DSCR8Q96T75 97 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 TRAV41A0A0B4J266 112 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
PRKD3-210ENST00000494667 KLKP1Q107X0 134 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 EEF1AKMT3Q96AZ1 226 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 IGLV5-39A0A0G2JS06 123 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 ODF3BA8MYP8 253 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 KLLNB2CW77 178 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 SPRY2O43597 315 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 SYNJ2BPP57105 145 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 FHL2Q14192 279 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 S100A7L2Q5SY68 101 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 PMS2CLQ68D20 193 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 NDUFA12Q9UI09 145 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 PHLDA3Q9Y5J5 127 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 DNAH14Q0VDD8 3507 aa3.53□□□□□ -1.84
PRKD3-210ENST00000494667 TRAV8-3A0A0A6YYJ7 113 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 FAM236DA0A1B0GTK5 79 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 H7C2G1 150 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 M0QY20 66 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 BAALC-AS2P0C853 105 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 FAM236CP0DP71 79 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 CFHR3Q02985 330 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 LINC00336Q6ZUF6 198 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 LINC00167Q96N53 147 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 DEFB127Q9H1M4 99 aa3.53□□□□□ -1.85
PRKD3-210ENST00000494667 VMO1Q7Z5L0 202 aa3.52□□□□□ -1.85
PRKD3-210ENST00000494667 Q8N2B8 174 aa3.52□□□□□ -1.85
PRKD3-210ENST00000494667 BEX4Q9NWD9 120 aaPredicted RBP3.52□□□□□ -1.85
PRKD3-210ENST00000494667 IGHG2P01859 326 aa3.52□□□□□ -1.85
PRKD3-210ENST00000494667 PIK3CD-AS1Q5SR53 167 aa3.52□□□□□ -1.85
PRKD3-210ENST00000494667 IGFL4Q6B9Z1 124 aa3.52□□□□□ -1.85
PRKD3-210ENST00000494667 LINC00308Q8TCZ7 52 aa3.52□□□□□ -1.85
PRKD3-210ENST00000494667 H7BZZ5 65 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 LYPD2Q6UXB3 125 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 DEFB108BQ8NET1 73 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 MAFAQ8NHW3 353 aaPredicted RBP3.51□□□□□ -1.85
PRKD3-210ENST00000494667 SDK2Q58EX2 2172 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 CACNA1EQ15878 2313 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 IGHV3-72A0A0B4J1Y9 119 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 A0A0J9YXV3 536 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 NDUFC1O43677 76 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 SEM1Q6ZVN7 128 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 M0R1B8 84 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 SEC61GP60059 68 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms