RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 C18orf65Q6ZTR6 163 aa8.34□□□□□ -1.07
CHMP3-209ENST00000494623 ZNF843Q8N446 348 aa8.34□□□□□ -1.07
CHMP3-209ENST00000494623 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
CHMP3-209ENST00000494623 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 DEFB136Q30KP8 78 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 POM121L12Q8N7R1 296 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 UBE2E2Q96LR5 201 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 VPS25Q9BRG1 176 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 CREBBPQ92793 2442 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 IGHV3-16A0A0C4DH30 117 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 K7EMI3 77 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 HLA-DRB4P13762 266 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 TCTEX1D4Q5JR98 221 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 Q8N1Y9 231 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 HLA-DRB4X5D2U9 266 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 NAV2Q8IVL1 2488 aa8.33□□□□□ -1.08
CHMP3-209ENST00000494623 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 LGALS9O00182 355 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 FSHBP01225 129 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 FXYD2P54710 66 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 SLURP1P55000 103 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 JMJD8Q96S16 334 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 DUSP14O95147 198 aaKnown RBP8.32□□□□□ -1.08
CHMP3-209ENST00000494623 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
CHMP3-209ENST00000494623 IGHV1OR15-1A0A075B7D0 117 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 DEFB113Q30KQ7 82 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 ODF3Q96PU9 254 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 VCYO14598 125 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 HTN1P15515 57 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 POLR2KP53803 58 aaKnown RBP8.31□□□□□ -1.08
CHMP3-209ENST00000494623 HIST2H2BDQ6DRA6 164 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 ZFP2Q6ZN57 461 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 C9orf85Q96MD7 179 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 Q96MF0 132 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 DUX3Q96PT4 197 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 GAGE12BA1L429 117 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 KNCNA6PVL3 124 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 ZNF56Q15929 161 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 CYSLTR1Q9Y271 337 aa8.31□□□□□ -1.08
CHMP3-209ENST00000494623 ZNF256Q9Y2P7 627 aaPredicted RBP8.31□□□□□ -1.08
CHMP3-209ENST00000494623 UBR5O95071 2799 aaPredicted RBP8.3□□□□□ -1.08
CHMP3-209ENST00000494623 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
CHMP3-209ENST00000494623 K7ERJ3 54 aa8.3□□□□□ -1.08
CHMP3-209ENST00000494623 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
CHMP3-209ENST00000494623 RPL39P62891 51 aaKnown RBP8.3□□□□□ -1.08
CHMP3-209ENST00000494623 KHDC1LQ5JSQ8 128 aa8.3□□□□□ -1.08
CHMP3-209ENST00000494623 FOXI2Q6ZQN5 318 aa8.3□□□□□ -1.08
CHMP3-209ENST00000494623 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
CHMP3-209ENST00000494623 CEND1Q8N111 149 aa8.3□□□□□ -1.08
CHMP3-209ENST00000494623 OR11H12B2RN74 326 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 EMP1P54849 157 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 DEFB131AP59861 70 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 OR11H1Q8NG94 326 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 OR11H2Q8NH07 326 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 CST9LQ9H4G1 147 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
CHMP3-209ENST00000494623 CR1P17927 2039 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 TSHBP01222 138 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 CRYGDP07320 174 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 ZNF876PQ49A33 203 aa8.29□□□□□ -1.08
CHMP3-209ENST00000494623 A0A1W2PPM0 123 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 AMTNQ6UX39 209 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 RNF152Q8N8N0 203 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 HIST1H4GQ99525 98 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 TM2D2Q9BX73 214 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 MYMXA0A1B0GTQ4 84 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 IGIPA6NJ69 53 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 RPL32P62910 135 aaKnown RBP8.28□□□□□ -1.08
CHMP3-209ENST00000494623 SAMD5Q5TGI4 173 aa8.28□□□□□ -1.08
CHMP3-209ENST00000494623 M0QY20 66 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 PRM2P04554 102 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 CD300EQ496F6 205 aaPredicted RBP8.27□□□□□ -1.09
CHMP3-209ENST00000494623 UFSP1Q6NVU6 142 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 MORN3Q6PF18 240 aaPredicted RBP8.27□□□□□ -1.09
CHMP3-209ENST00000494623 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 LINC01619G3V211 115 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 K7EP34 96 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 RBMY1A1P0DJD3 496 aaKnown RBP8.27□□□□□ -1.09
CHMP3-209ENST00000494623 RBMY1CP0DJD4 496 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 RBMY1FQ15415 496 aaKnown RBP8.27□□□□□ -1.09
CHMP3-209ENST00000494623 SPCS1Q9Y6A9 102 aa8.27□□□□□ -1.09
CHMP3-209ENST00000494623 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 TRBV6-5A0A0K0K1A5 114 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 C11orf86A6NJI1 115 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 E9PLD3 99 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 FABP2P12104 132 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 SCGB2A2Q13296 93 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 PMVKQ15126 192 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 MYO9AB2RTY4 2548 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 TLN2Q9Y4G6 2542 aa8.26□□□□□ -1.09
CHMP3-209ENST00000494623 TRGV11A0A075B6L2 103 aa8.25□□□□□ -1.09
CHMP3-209ENST00000494623 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
CHMP3-209ENST00000494623 LRRC75A-AS1Q8N1F1 130 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms