RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 C20orf144Q9BQM9 153 aa12.09□□□□□ -0.47
ATG4B-225ENST00000494465 JMJD1CQ15652 2540 aa12.08□□□□□ -0.47
ATG4B-225ENST00000494465 BEAN1Q3B7T3 259 aa12.08□□□□□ -0.47
ATG4B-225ENST00000494465 C19orf73Q9NVV2 129 aa12.08□□□□□ -0.47
ATG4B-225ENST00000494465 F8P00451 2351 aa12.08□□□□□ -0.48
ATG4B-225ENST00000494465 A0A087WWL8 130 aa12.08□□□□□ -0.48
ATG4B-225ENST00000494465 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
ATG4B-225ENST00000494465 STHQ8IWL8 128 aa12.08□□□□□ -0.48
ATG4B-225ENST00000494465 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 LINC00467Q9BRT7 94 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 MCRIP2Q9BUT9 160 aaKnown RBP12.07□□□□□ -0.48
ATG4B-225ENST00000494465 TENM1Q9UKZ4 2725 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 CRYGDP07320 174 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 SMIM17P0DL12 118 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 HTN1P15515 57 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 FCER1GP30273 86 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 SUMO2P61956 95 aaKnown RBP12.07□□□□□ -0.48
ATG4B-225ENST00000494465 C20orf78Q9BR46 151 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 SMIM2Q9BVW6 85 aa12.07□□□□□ -0.48
ATG4B-225ENST00000494465 INSP01308 110 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 LINC01545Q5VT33 79 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 FAM110AQ9BQ89 295 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 PF4P02776 101 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 ZNF876PQ49A33 203 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 SUMO4Q6EEV6 95 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-225ENST00000494465 SVIPQ8NHG7 77 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 XCL2Q9UBD3 114 aa12.06□□□□□ -0.48
ATG4B-225ENST00000494465 TCAPO15273 167 aa12.05□□□□□ -0.48
ATG4B-225ENST00000494465 SPATA45Q537H7 98 aa12.05□□□□□ -0.48
ATG4B-225ENST00000494465 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
ATG4B-225ENST00000494465 VWFP04275 2813 aa12.05□□□□□ -0.48
ATG4B-225ENST00000494465 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-225ENST00000494465 TMEM158Q8WZ71 300 aa12.05□□□□□ -0.48
ATG4B-225ENST00000494465 LINC01587Q99440 93 aa12.05□□□□□ -0.48
ATG4B-225ENST00000494465 H0Y8G0 127 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 LAGE3Q14657 143 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 C11orf72Q8NBR9 251 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 C1orf158Q8N1D5 194 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 SPATA3Q8NHX4 192 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
ATG4B-225ENST00000494465 C20orf202A1L168 122 aa12.03□□□□□ -0.48
ATG4B-225ENST00000494465 PPP1R17O96001 155 aa12.03□□□□□ -0.48
ATG4B-225ENST00000494465 IFI27L1Q96BM0 104 aa12.03□□□□□ -0.48
ATG4B-225ENST00000494465 C14orf144Q96I85 54 aa12.03□□□□□ -0.48
ATG4B-225ENST00000494465 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
ATG4B-225ENST00000494465 GIG44P09565 113 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-225ENST00000494465 PMCHL2Q9BQD1 86 aa12.03□□□□□ -0.48
ATG4B-225ENST00000494465 ZNF415Q09FC8 603 aa12.02□□□□□ -0.49
ATG4B-225ENST00000494465 ZNF705AQ6ZN79 300 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-225ENST00000494465 IGLL1P15814 213 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 DEFA6Q01524 100 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 C18orf15Q96N68 181 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 CITED1Q99966 193 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 F5H697 171 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 M0R2P5 195 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 MORN3Q6PF18 240 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-225ENST00000494465 PTH2Q96A98 100 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
ATG4B-225ENST00000494465 M0QY20 66 aa12□□□□□ -0.49
ATG4B-225ENST00000494465 AZU1P20160 251 aa12□□□□□ -0.49
ATG4B-225ENST00000494465 NUTF2P61970 127 aaKnown RBP12□□□□□ -0.49
ATG4B-225ENST00000494465 RPL32P62910 135 aaKnown RBP12□□□□□ -0.49
ATG4B-225ENST00000494465 CSTL1Q9H114 145 aa12□□□□□ -0.49
ATG4B-225ENST00000494465 TEP1Q99973 2627 aaKnown RBP12□□□□□ -0.49
ATG4B-225ENST00000494465 IGLC3P0DOY3 106 aa12□□□□□ -0.49
ATG4B-225ENST00000494465 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
ATG4B-225ENST00000494465 PIK3CD-AS1Q5SR53 167 aa12□□□□□ -0.49
ATG4B-225ENST00000494465 ATRQ13535 2644 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 ZNF56Q15929 161 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 LGALS9BQ3B8N2 356 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 LGALS9CQ6DKI2 356 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 hDV102S1A0JD36 115 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 K7EMI3 77 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 NEGR1Q7Z3B1 354 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 ST20Q9HBF5 79 aa11.99□□□□□ -0.49
ATG4B-225ENST00000494465 NUDT3O95989 172 aa11.98□□□□□ -0.49
ATG4B-225ENST00000494465 ORMDL2Q53FV1 153 aa11.98□□□□□ -0.49
ATG4B-225ENST00000494465 IL17DQ8TAD2 202 aa11.98□□□□□ -0.49
ATG4B-225ENST00000494465 TMEM208Q9BTX3 173 aa11.98□□□□□ -0.49
ATG4B-225ENST00000494465 IGHV3OR16-12A0A075B7B8 117 aa11.97□□□□□ -0.49
ATG4B-225ENST00000494465 SPXQ9BT56 116 aa11.97□□□□□ -0.49
ATG4B-225ENST00000494465 A8MWV9 139 aa11.96□□□□□ -0.49
ATG4B-225ENST00000494465 RPL35AP18077 110 aaKnown RBP11.96□□□□□ -0.49
ATG4B-225ENST00000494465 RNASE8Q8TDE3 154 aaKnown RBP11.96□□□□□ -0.49
ATG4B-225ENST00000494465 NOTCH3Q9UM47 2321 aa11.96□□□□□ -0.5
ATG4B-225ENST00000494465 SDHAF1A6NFY7 115 aa11.96□□□□□ -0.5
ATG4B-225ENST00000494465 CSNK1G2-AS1Q8NCQ2 148 aa11.96□□□□□ -0.5
ATG4B-225ENST00000494465 TOMM6Q96B49 74 aa11.96□□□□□ -0.5
ATG4B-225ENST00000494465 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.5
ATG4B-225ENST00000494465 GOLT1BQ9Y3E0 138 aa11.96□□□□□ -0.5
ATG4B-225ENST00000494465 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
ATG4B-225ENST00000494465 INSL3P51460 131 aa11.95□□□□□ -0.5
ATG4B-225ENST00000494465 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
ATG4B-225ENST00000494465 MRPL16Q9NX20 251 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms