RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 S100A4P26447 101 aaKnown RBP4.92□□□□□ -1.62
MSH5-217ENST00000494458 S100A2P29034 98 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 EGFEM1PQ0D2K5 195 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 SHISA2Q6UWI4 295 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 SMIM15Q7Z3B0 74 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 OR10D4PQ8NGN7 298 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 RNASE8Q8TDE3 154 aaKnown RBP4.92□□□□□ -1.62
MSH5-217ENST00000494458 RASL10AQ92737 203 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 C20orf78Q9BR46 151 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 NAGKQ9UJ70 344 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 A0A096LNJ9 63 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 KIR2DL5BA0A0G2JN68 375 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 KIR2DL5BA0A0G2JPC4 375 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 TRBV6-5A0A0K0K1A5 114 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 PLAC8L1A1L4L8 177 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 A8MZ25 164 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 K7EMI3 77 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 PPP1R17O96001 155 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 CKS2P33552 79 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 FXYD7P58549 80 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 DAZ2Q13117 558 aaKnown RBP4.91□□□□□ -1.62
MSH5-217ENST00000494458 PDZD11Q5EBL8 140 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 PRR31Q5SQ13 230 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 Q6ZWC4 215 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 KIR2DL5AQ8N109 375 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 Q8N976 141 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 KIR2DL5BQ8NHK3 375 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 AP1S3Q96PC3 154 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 OVOL2Q9BRP0 275 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 C1QTNF4Q9BXJ3 329 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 ANK2Q01484 3957 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 MAST4O15021 2626 aa4.91□□□□□ -1.62
MSH5-217ENST00000494458 CBY3A6NI87 242 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 M0QY20 66 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 M0R2P5 195 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 GATA1P15976 413 aaPredicted RBP4.9□□□□□ -1.63
MSH5-217ENST00000494458 AZU1P20160 251 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 IFI27P40305 119 aaPredicted RBP4.9□□□□□ -1.63
MSH5-217ENST00000494458 AKR1D1P51857 326 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.63
MSH5-217ENST00000494458 LGALS9BQ3B8N2 356 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 ZNF876PQ49A33 203 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 SPATA12Q7Z6I5 190 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 C14orf178Q8N769 122 aaPredicted RBP4.9□□□□□ -1.63
MSH5-217ENST00000494458 Q8N8P6 123 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 SYT8Q8NBV8 401 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 TMEM263Q8WUH6 116 aaKnown RBP4.9□□□□□ -1.63
MSH5-217ENST00000494458 LINC01587Q99440 93 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 WFDC10AQ9H1F0 79 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 JPT2Q9H910 190 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 NXT2Q9NPJ8 142 aaKnown RBP4.9□□□□□ -1.63
MSH5-217ENST00000494458 AP5S1Q9NUS5 200 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 XCL2Q9UBD3 114 aa4.9□□□□□ -1.63
MSH5-217ENST00000494458 IGHV1-24A0A0C4DH33 117 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 A8MWV9 139 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 RS1O15537 224 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 HSBP1O75506 76 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 PRM2P04554 102 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 IGLL1P15814 213 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 AMTP48728 403 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 SSTP61278 116 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 ZNF415Q09FC8 603 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 ZFP2Q6ZN57 461 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 FAM19A2Q8N3H0 131 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 LINC00612Q8N6U2 182 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 C18orf15Q96N68 181 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 C12orf57Q99622 126 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 SAMD10Q9BYL1 202 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 CSTL1Q9H114 145 aa4.89□□□□□ -1.63
MSH5-217ENST00000494458 NOTCH3Q9UM47 2321 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 SMIM9A6NGZ8 99 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 CIDEAO60543 219 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 NCR2O95944 276 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 C3orf79P0CE67 100 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 SUMO2P61956 95 aaKnown RBP4.88□□□□□ -1.63
MSH5-217ENST00000494458 CFAP126Q5VTH2 177 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 PRSS3P2Q8NHM4 247 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 MAP1LC3AQ9H492 121 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 GOLT1BQ9Y3E0 138 aa4.88□□□□□ -1.63
MSH5-217ENST00000494458 TRAV26-2A0A0B4J265 109 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 IGHV3-53P01767 116 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 FCER1GP30273 86 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 RNASEKQ6P5S7 137 aaKnown RBP4.87□□□□□ -1.63
MSH5-217ENST00000494458 TEX43Q6ZNM6 134 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 FA2HQ7L5A8 372 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 C3orf56Q8N813 242 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 C16orf74Q96GX8 76 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 SMIM2Q9BVW6 85 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 TIMM8BQ9Y5J9 83 aaPredicted RBP4.87□□□□□ -1.63
MSH5-217ENST00000494458 X6R8D5 127 aa4.87□□□□□ -1.63
MSH5-217ENST00000494458 A0A087WWL8 130 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 RHODO00212 210 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 LEPROTL1O95214 131 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 SMIM17P0DL12 118 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms