RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CYSTM1Q9H1C7 97 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 BOKQ9UMX3 212 aaPredicted RBP2.3□□□□□ -2.04
SMC2-205ENST00000493955 MAP1AP78559 2803 aaPredicted RBP2.29□□□□□ -2.04
SMC2-205ENST00000493955 ROS1P08922 2347 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 LYZL6O75951 148 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 GADD45GO95257 159 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 CDK5R1Q15078 307 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 MORN4Q8NDC4 146 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 TEX47Q8TBZ9 253 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 AIF1LQ9BQI0 150 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 MED9Q9NWA0 146 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 CADP27708 2225 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 COL6A5A8TX70 2615 aa2.29□□□□□ -2.04
SMC2-205ENST00000493955 MIF4GDA9UHW6 222 aaKnown RBP2.28□□□□□ -2.04
SMC2-205ENST00000493955 TIMM17BO60830 172 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 GLRXP35754 106 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 C6orf52Q5T4I8 152 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 C15orf53Q8NAA6 179 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 NUP35Q8NFH5 326 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 SFT2D1Q8WV19 159 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 SLC25A21Q9BQT8 299 aaPredicted RBP2.28□□□□□ -2.04
SMC2-205ENST00000493955 REG4Q9BYZ8 158 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 C6orf62Q9GZU0 229 aaPredicted RBP2.28□□□□□ -2.04
SMC2-205ENST00000493955 C14orf132Q9NPU4 83 aa2.28□□□□□ -2.04
SMC2-205ENST00000493955 ANK2Q01484 3957 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 TRAV12-1A0A0B4J245 112 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 A8MWV9 139 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 PGRMC1O00264 195 aaKnown RBP2.27□□□□□ -2.05
SMC2-205ENST00000493955 RNASE3P12724 160 aaKnown RBP2.27□□□□□ -2.05
SMC2-205ENST00000493955 DYNLT3P51808 116 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 EIF5AL1Q6IS14 154 aaKnown RBP2.27□□□□□ -2.05
SMC2-205ENST00000493955 ZNF418Q8TF45 676 aaPredicted RBP2.27□□□□□ -2.05
SMC2-205ENST00000493955 LINC00467Q9BRT7 94 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 NPCDR1Q9BY65 106 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 ATPIF1Q9UII2 106 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 ASB4Q9Y574 426 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 MXRA5Q9NR99 2828 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 SVEP1Q4LDE5 3571 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 ATRQ13535 2644 aa2.27□□□□□ -2.05
SMC2-205ENST00000493955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.27□□□□□ -2.054e-7■■■■□ 26.6
SMC2-205ENST00000493955 HEATR1Q9H583 2144 aaKnown RBP2.27□□□□□ -2.05
SMC2-205ENST00000493955 STAB1Q9NY15 2570 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 CSN2P05814 226 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 INSL3P51460 131 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 PLCXD2Q0VAA5 305 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 UNQ6190/PRO20217Q6UXQ8 127 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 RPS27LQ71UM5 84 aaKnown RBP2.26□□□□□ -2.05
SMC2-205ENST00000493955 Q8IYB0 196 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 FAM24BQ8N5W8 94 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 PLEKHB2Q96CS7 222 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 GPX7Q96SL4 187 aaPredicted RBP2.26□□□□□ -2.05
SMC2-205ENST00000493955 CENPHQ9H3R5 247 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 NBEAL1Q6ZS30 2694 aa2.26□□□□□ -2.05
SMC2-205ENST00000493955 IFNA14P01570 189 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 TRGC2P03986 189 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 CRHP06850 196 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 RAB4BP61018 213 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 SARNPP82979 210 aaKnown RBP2.25□□□□□ -2.05
SMC2-205ENST00000493955 NCMAPQ5T1S8 102 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 EFCAB11Q9BUY7 163 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 POPDC3Q9HBV1 291 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 MED11Q9P086 117 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 RNF11Q9Y3C5 154 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 B2MP61769 119 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 SLC48A1Q6P1K1 146 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.25□□□□□ -2.05
SMC2-205ENST00000493955 C4orf22Q6V702 233 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 IFT20Q8IY31 132 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 OR10K1Q8NGX5 313 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 C10orf105Q8TEF2 133 aa2.25□□□□□ -2.05
SMC2-205ENST00000493955 MAGOHBQ96A72 148 aaKnown RBP2.25□□□□□ -2.05
SMC2-205ENST00000493955 PLCE1Q9P212 2302 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 TANC2Q9HCD6 1990 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 IGKV3OR2-268A0A0C4DH90 116 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 IGKV2-29A2NJV5 120 aaPredicted RBP2.24□□□□□ -2.05
SMC2-205ENST00000493955 GPR31O00270 319 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 DSCR4P56555 118 aaPredicted RBP2.24□□□□□ -2.05
SMC2-205ENST00000493955 SURF2Q15527 256 aaPredicted RBP2.24□□□□□ -2.05
SMC2-205ENST00000493955 LTC4SQ16873 150 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 COMMD6Q7Z4G1 85 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 LRTM1Q9HBL6 345 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 SMPXQ9UHP9 88 aa2.24□□□□□ -2.05
SMC2-205ENST00000493955 SOX21Q9Y651 276 aaPredicted RBP2.24□□□□□ -2.05
SMC2-205ENST00000493955 A0A1B0GV72 72 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 MAP1LC3B2A6NCE7 125 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 ATP6V1G2-DDX39BF2Z307 99 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 SCIMPQ6UWF3 145 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 OR2T35Q8NGX2 323 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 DYDC1Q8WWB3 177 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 BPESC1Q9GZL8 116 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 MAP1LC3BQ9GZQ8 125 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 CBLN4Q9NTU7 201 aa2.23□□□□□ -2.05
SMC2-205ENST00000493955 UQCRHLA0A096LP55 91 aa2.22□□□□□ -2.05
SMC2-205ENST00000493955 IGLV3-32A0A0A0MS00 114 aa2.22□□□□□ -2.05
SMC2-205ENST00000493955 LYNX1G3V0Z9 82 aa2.22□□□□□ -2.05
SMC2-205ENST00000493955 LYNX1P0DP58 116 aa2.22□□□□□ -2.05
SMC2-205ENST00000493955 GNG11P61952 73 aa2.22□□□□□ -2.05
SMC2-205ENST00000493955 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.22□□□□□ -2.05
SMC2-205ENST00000493955 RTL8AQ9BWD3 113 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms