RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 TPT1P13693 172 aaKnown RBP7.7□□□□□ -1.18
COL6A3-213ENST00000493475 PKIAP61925 76 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 HAMPP81172 84 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 IFITM3Q01628 133 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 Q0VG73 95 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 C14orf177Q52M58 125 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 FAM74A4Q5TZK3 123 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 TCEAL7Q9BRU2 100 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 ARL2-SNX15V9GYD0 113 aa7.7□□□□□ -1.18
COL6A3-213ENST00000493475 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.69□□□□□ -1.18
COL6A3-213ENST00000493475 IGKV2D-24A0A075B6R9 120 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 TRBV10-1A0A0K0K1A3 114 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 CTXND1A0A1B0GTU2 59 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 PEX7O00628 323 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 IGLV2-11P01706 119 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 RPL36AP83881 106 aaKnown RBP7.69□□□□□ -1.18
COL6A3-213ENST00000493475 AKR1C8PQ5T2L2 129 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 FAM162BQ5T6X4 162 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 STOML3Q8TAV4 291 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 RPL36ALQ969Q0 106 aaKnown RBP7.69□□□□□ -1.18
COL6A3-213ENST00000493475 FMC1Q96HJ9 113 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 KRTAP4-2Q9BYR5 136 aa7.69□□□□□ -1.18
COL6A3-213ENST00000493475 H3BVH4 76 aa7.68□□□□□ -1.18
COL6A3-213ENST00000493475 CRPP02741 224 aa7.68□□□□□ -1.18
COL6A3-213ENST00000493475 DAZ4Q86SG3 579 aaKnown RBP7.68□□□□□ -1.18
COL6A3-213ENST00000493475 Q86TA4 180 aa7.68□□□□□ -1.18
COL6A3-213ENST00000493475 ZFP82Q8N141 532 aa7.68□□□□□ -1.18
COL6A3-213ENST00000493475 DAZ3Q9NR90 486 aaKnown RBP7.68□□□□□ -1.18
COL6A3-213ENST00000493475 ALG5Q9Y673 324 aa7.68□□□□□ -1.18
COL6A3-213ENST00000493475 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
COL6A3-213ENST00000493475 TRAV34A0A0B4J273 112 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 IGKV3D-20A0A0C4DH25 116 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 LECT2O14960 151 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 PTTG1O95997 202 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 GIPP09681 153 aaPredicted RBP7.67□□□□□ -1.18
COL6A3-213ENST00000493475 ARMS2P0C7Q2 107 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 UBE2G2P60604 165 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 DNLZQ5SXM8 178 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 NIT1Q86X76 327 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 LINC00479Q96M42 142 aa7.67□□□□□ -1.18
COL6A3-213ENST00000493475 FAT1Q14517 4588 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 M0R036 132 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 M0R381 172 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 Q6ZSA8 131 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 C1orf43Q9BWL3 253 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 KLK12Q9UKR0 248 aa7.66□□□□□ -1.18
COL6A3-213ENST00000493475 TRBV7-3A0A075B6L6 115 aa7.65□□□□□ -1.18
COL6A3-213ENST00000493475 FXYD6-FXYD2A0A087WZ82 144 aa7.65□□□□□ -1.18
COL6A3-213ENST00000493475 KRBOX1C9JBD0 128 aa7.65□□□□□ -1.18
COL6A3-213ENST00000493475 TMEM262E9PQX1 116 aa7.65□□□□□ -1.18
COL6A3-213ENST00000493475 TMEM97Q5BJF2 176 aa7.65□□□□□ -1.18
COL6A3-213ENST00000493475 C14orf178Q8N769 122 aaPredicted RBP7.65□□□□□ -1.18
COL6A3-213ENST00000493475 SFRP2Q96HF1 295 aa7.65□□□□□ -1.18
COL6A3-213ENST00000493475 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.18
COL6A3-213ENST00000493475 A0A087WWL8 130 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 FAM74A7A6NL05 159 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 SH2D1AO60880 128 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 S100A9P06702 114 aaKnown RBP7.64□□□□□ -1.19
COL6A3-213ENST00000493475 AKR1C3P42330 323 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 CST9LP1Q5W188 147 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 RPL7L1Q6DKI1 246 aaKnown RBP7.64□□□□□ -1.19
COL6A3-213ENST00000493475 COX8CQ7Z4L0 72 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 ZC2HC1AQ96GY0 325 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 CHAC1Q9BUX1 264 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 SAMD10Q9BYL1 202 aa7.64□□□□□ -1.19
COL6A3-213ENST00000493475 GRIFINA4D1Z8 144 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 MAP1LC3B2A6NCE7 125 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 RNF222A6NCQ9 220 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
COL6A3-213ENST00000493475 PFDN1O60925 122 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 FHITP49789 147 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 ZNF56Q15929 161 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 SERTAD4-AS1Q5TG53 156 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 UFSP1Q6NVU6 142 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 MAP1LC3BQ9GZQ8 125 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 JPT2Q9H910 190 aa7.63□□□□□ -1.19
COL6A3-213ENST00000493475 TMSB15BA0A087X1C1 80 aa7.62□□□□□ -1.19
COL6A3-213ENST00000493475 TRBV6-1A0A0K0K1D8 114 aa7.62□□□□□ -1.19
COL6A3-213ENST00000493475 RAB4BP61018 213 aa7.62□□□□□ -1.19
COL6A3-213ENST00000493475 WFDC2Q14508 124 aa7.62□□□□□ -1.19
COL6A3-213ENST00000493475 SCXQ7RTU7 201 aa7.62□□□□□ -1.19
COL6A3-213ENST00000493475 ZNF471Q9BX82 626 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-213ENST00000493475 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
COL6A3-213ENST00000493475 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 LTAP01374 205 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 ANGP03950 147 aaKnown RBP7.61□□□□□ -1.19
COL6A3-213ENST00000493475 UBE2D3P61077 147 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 UBE2D2P62837 147 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 MIAQ16674 131 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 ZNF674Q2M3X9 581 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 SPANXN1Q5VSR9 72 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 ATRAIDQ6UW56 229 aa7.61□□□□□ -1.19
COL6A3-213ENST00000493475 CHCHD5Q9BSY4 110 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms