RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LINC01587Q99440 93 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 LSM5Q9Y4Y9 91 aaKnown RBP6.41□□□□□ -1.38
HDAC3-212ENST00000492407 TIMM8BQ9Y5J9 83 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-212ENST00000492407 A6NDN8 102 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 PMS2P5A8MQ11 134 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 H3BNG1 76 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 LINC00869P0C866 280 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 DEFB130BP0DP73 79 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 DEFB130AP0DP74 79 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 GATA2P23769 480 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-212ENST00000492407 RPL12P30050 165 aaKnown RBP6.4□□□□□ -1.38
HDAC3-212ENST00000492407 CTRLP40313 264 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 ELOBQ15370 118 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 ACOT6Q3I5F7 207 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-212ENST00000492407 CD164L2Q6UWJ8 174 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 TMEM14EPQ6UXP3 125 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 OR10J6PQ8NGY7 276 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 TMED6Q8WW62 240 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 FRZBQ92765 325 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 SLC50A1Q9BRV3 221 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 MLST8Q9BVC4 326 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 PSENENQ9NZ42 101 aa6.4□□□□□ -1.38
HDAC3-212ENST00000492407 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 IGLC3P0DOY3 106 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 TPT1P13693 172 aaKnown RBP6.39□□□□□ -1.39
HDAC3-212ENST00000492407 BTCP35070 178 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 LINC01620Q4KN68 170 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 OR10J3Q5JRS4 329 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 TEPPQ6URK8 271 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 LCN15Q6UWW0 184 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 RNF182Q8N6D2 247 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 OR10P1Q8NGE3 313 aa6.39□□□□□ -1.39
HDAC3-212ENST00000492407 TMEM263Q8WUH6 116 aaKnown RBP6.39□□□□□ -1.39
HDAC3-212ENST00000492407 WDR61Q9GZS3 305 aaKnown RBP6.39□□□□□ -1.39
HDAC3-212ENST00000492407 TRAV12-2A0A075B6T6 113 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 H3BP45 60 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 TAAR5O14804 337 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 MRPS12O15235 138 aaKnown RBP6.38□□□□□ -1.39
HDAC3-212ENST00000492407 NDUFB6O95139 128 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 TRGC2P03986 189 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 TAL2Q16559 108 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 TTC32Q5I0X7 151 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 IGFL4Q6B9Z1 124 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 AMMECR1LQ6DCA0 310 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 PATE2Q6UY27 113 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 ZNF575Q86XF7 245 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 BPIFA4PQ86YQ2 179 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 LINC00612Q8N6U2 182 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 ODF3Q96PU9 254 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 SH3BGRL3Q9H299 93 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 ZNF331Q9NQX6 463 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-212ENST00000492407 LINC00588Q9Y4M8 146 aa6.38□□□□□ -1.39
HDAC3-212ENST00000492407 AGPAT2O15120 278 aa6.37□□□□□ -1.39
HDAC3-212ENST00000492407 XGP55808 180 aa6.37□□□□□ -1.39
HDAC3-212ENST00000492407 TNP2Q05952 138 aa6.37□□□□□ -1.39
HDAC3-212ENST00000492407 Q6Q795 121 aa6.37□□□□□ -1.39
HDAC3-212ENST00000492407 UPK3BQ9BT76 320 aa6.37□□□□□ -1.39
HDAC3-212ENST00000492407 Q9H8V8 135 aa6.37□□□□□ -1.39
HDAC3-212ENST00000492407 PXMP4Q9Y6I8 212 aa6.37□□□□□ -1.39
HDAC3-212ENST00000492407 K7EP34 96 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 SSSCA1O60232 199 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 PRM2P04554 102 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 Q6ZN92 141 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 LINC00305Q7Z4B0 112 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 GNPNAT1Q96EK6 184 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-212ENST00000492407 TMEM101Q96IK0 257 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 C18orf15Q96N68 181 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 Q9H3A6 140 aa6.36□□□□□ -1.39
HDAC3-212ENST00000492407 NOP10Q9NPE3 64 aaKnown RBP6.36□□□□□ -1.39
HDAC3-212ENST00000492407 FXYD6-FXYD2A0A087WZ82 144 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 C9JAW5 83 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 ZNF253O75346 499 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 SEC11BP0C7V7 166 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 VPREB1P12018 145 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 LEPP41159 167 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 SRSF3P84103 164 aaKnown RBP6.35□□□□□ -1.39
HDAC3-212ENST00000492407 DAZ2Q13117 558 aaKnown RBP6.35□□□□□ -1.39
HDAC3-212ENST00000492407 Q6ZRG5 221 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 PYGO2Q9BRQ0 406 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 LINC00467Q9BRT7 94 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 MRPL32Q9BYC8 188 aaKnown RBP6.35□□□□□ -1.39
HDAC3-212ENST00000492407 PARLQ9H300 379 aa6.35□□□□□ -1.39
HDAC3-212ENST00000492407 A0A087WWL8 130 aa6.34□□□□□ -1.39
HDAC3-212ENST00000492407 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
HDAC3-212ENST00000492407 COX7A2P2O60397 106 aa6.34□□□□□ -1.39
HDAC3-212ENST00000492407 HTN1P15515 57 aa6.34□□□□□ -1.39
HDAC3-212ENST00000492407 SLC38A11Q08AI6 406 aa6.34□□□□□ -1.39
HDAC3-212ENST00000492407 C10orf113Q5VZT2 155 aa6.34□□□□□ -1.39
HDAC3-212ENST00000492407 TMEM37Q8WXS4 190 aa6.34□□□□□ -1.39
HDAC3-212ENST00000492407 MRPL53Q96EL3 112 aaKnown RBP6.34□□□□□ -1.39
HDAC3-212ENST00000492407 NACAE9PAV3 2078 aa6.34□□□□□ -1.4
HDAC3-212ENST00000492407 SEC11AP67812 179 aa6.33□□□□□ -1.4
HDAC3-212ENST00000492407 FFAR4Q5NUL3 377 aa6.33□□□□□ -1.4
HDAC3-212ENST00000492407 Q8N1X5 172 aa6.33□□□□□ -1.4
HDAC3-212ENST00000492407 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
HDAC3-212ENST00000492407 MGST2Q99735 147 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms