RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SUMO4Q6EEV6 95 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 C2orf66Q6UXQ4 117 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 ZMAT4Q9H898 229 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 IGHV3-73A0A0B4J1V6 119 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 A0A0J9YX75 114 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-220ENST00000492280 H3BUT2 72 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 LINC00315P59091 139 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 K7EMT4 169 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 LGALS1P09382 135 aaKnown RBP9.25□□□□□ -0.93
HMGN1-220ENST00000492280 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
HMGN1-220ENST00000492280 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
HMGN1-220ENST00000492280 APRG1Q8IVJ8 170 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 ZNF256Q9Y2P7 627 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-220ENST00000492280 PDZD2O15018 2839 aa9.25□□□□□ -0.93
HMGN1-220ENST00000492280 K7EQG2 157 aa9.24□□□□□ -0.93
HMGN1-220ENST00000492280 DEFB113Q30KQ7 82 aa9.24□□□□□ -0.93
HMGN1-220ENST00000492280 TCTEX1D4Q5JR98 221 aa9.24□□□□□ -0.93
HMGN1-220ENST00000492280 Q6YL49 198 aa9.24□□□□□ -0.93
HMGN1-220ENST00000492280 KIF25-AS1Q9Y6Z4 181 aa9.24□□□□□ -0.93
HMGN1-220ENST00000492280 FN1P02751 2386 aaKnown RBP9.24□□□□□ -0.93
HMGN1-220ENST00000492280 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
HMGN1-220ENST00000492280 ATP5LO75964 103 aa9.24□□□□□ -0.93
HMGN1-220ENST00000492280 SNRPD3P62318 126 aaKnown RBP9.24□□□□□ -0.93
HMGN1-220ENST00000492280 ANK3Q12955 4377 aaKnown RBP9.23□□□□□ -0.93
HMGN1-220ENST00000492280 A0A087WX48 190 aa9.23□□□□□ -0.93
HMGN1-220ENST00000492280 ZNF56Q15929 161 aa9.23□□□□□ -0.93
HMGN1-220ENST00000492280 WFDC11Q8NEX6 87 aa9.23□□□□□ -0.93
HMGN1-220ENST00000492280 CHAC1Q9BUX1 264 aa9.23□□□□□ -0.93
HMGN1-220ENST00000492280 HIVEP2P31629 2446 aa9.23□□□□□ -0.93
HMGN1-220ENST00000492280 GCN1Q92616 2671 aaKnown RBP9.22□□□□□ -0.93
HMGN1-220ENST00000492280 A0A1W2PRX2 142 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 HSD52Q0P140 79 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 OR11H1Q8NG94 326 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 TP53TG1Q9Y2A0 90 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 IGHV3-16A0A0C4DH30 117 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 J3QLI3 93 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 FSHBP01225 129 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 DEFB131AP59861 70 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 OR9G4Q8NGQ1 327 aa9.22□□□□□ -0.93
HMGN1-220ENST00000492280 OPRPNQ99935 248 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-220ENST00000492280 CHTOPQ9Y3Y2 248 aaKnown RBP9.22□□□□□ -0.93
HMGN1-220ENST00000492280 P0DMU3 169 aa9.21□□□□□ -0.93
HMGN1-220ENST00000492280 FAM231AP0DMU4 169 aa9.21□□□□□ -0.93
HMGN1-220ENST00000492280 FAM231CP0DMU5 169 aa9.21□□□□□ -0.93
HMGN1-220ENST00000492280 CDKN1BP46527 198 aa9.21□□□□□ -0.93
HMGN1-220ENST00000492280 TOMM6Q96B49 74 aa9.21□□□□□ -0.93
HMGN1-220ENST00000492280 PRSS47A8MTI9 375 aa9.21□□□□□ -0.94
HMGN1-220ENST00000492280 PROK1P58294 105 aa9.21□□□□□ -0.94
HMGN1-220ENST00000492280 ORMDL2Q53FV1 153 aa9.21□□□□□ -0.94
HMGN1-220ENST00000492280 KMT2BQ9UMN6 2715 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-220ENST00000492280 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 PRSS29PA6NIE9 313 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 TMEM61Q8N0U2 210 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 NHP2Q9NX24 153 aaKnown RBP9.2□□□□□ -0.94
HMGN1-220ENST00000492280 Q9UF83 564 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 F8VRH5 84 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 TSHBP01222 138 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 SEC11AP67812 179 aa9.2□□□□□ -0.94
HMGN1-220ENST00000492280 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-220ENST00000492280 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 VWFP04275 2813 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 IGHV1OR15-1A0A075B7D0 117 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
HMGN1-220ENST00000492280 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
HMGN1-220ENST00000492280 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
HMGN1-220ENST00000492280 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 C20orf78Q9BR46 151 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 ZNF580Q9UK33 172 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 NXPH4O95158 308 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 ELANEP08246 267 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 CD300EQ496F6 205 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-220ENST00000492280 ZNF876PQ49A33 203 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 UBE2E2Q96LR5 201 aa9.19□□□□□ -0.94
HMGN1-220ENST00000492280 H7C1H1 209 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 C21orf62-AS1Q17RA5 79 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 AMTNQ6UX39 209 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 ZFP2Q6ZN57 461 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 KLHL30-AS1Q8NEE0 82 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 DLX4Q92988 240 aaPredicted RBP9.18□□□□□ -0.94
HMGN1-220ENST00000492280 A6NDN8 102 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 CRYGDP07320 174 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 MED14OSP0DP75 135 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 C9orf85Q96MD7 179 aa9.18□□□□□ -0.94
HMGN1-220ENST00000492280 HLA-DRB4P13762 266 aa9.17□□□□□ -0.94
HMGN1-220ENST00000492280 HLA-DRB4X5D2U9 266 aa9.17□□□□□ -0.94
HMGN1-220ENST00000492280 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
HMGN1-220ENST00000492280 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
HMGN1-220ENST00000492280 C9orf118A6NHY6 69 aa9.17□□□□□ -0.94
HMGN1-220ENST00000492280 C11orf86A6NJI1 115 aa9.17□□□□□ -0.94
HMGN1-220ENST00000492280 POLR2KP53803 58 aaKnown RBP9.17□□□□□ -0.94
HMGN1-220ENST00000492280 PLNP26678 52 aa9.16□□□□□ -0.94
HMGN1-220ENST00000492280 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
HMGN1-220ENST00000492280 PRADC1Q9BSG0 188 aa9.16□□□□□ -0.94
HMGN1-220ENST00000492280 CYSLTR1Q9Y271 337 aa9.16□□□□□ -0.94
HMGN1-220ENST00000492280 OR11H12B2RN74 326 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 299 ms