RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 FAM162BQ5T6X4 162 aa10.4□□□□□ -0.74
SMPD4-220ENST00000491319 COX8CQ7Z4L0 72 aa10.4□□□□□ -0.74
SMPD4-220ENST00000491319 FMC1Q96HJ9 113 aa10.4□□□□□ -0.74
SMPD4-220ENST00000491319 ZFP30Q9Y2G7 519 aa10.4□□□□□ -0.74
SMPD4-220ENST00000491319 SRRM2Q9UQ35 2752 aaKnown RBP10.4□□□□□ -0.74
SMPD4-220ENST00000491319 DNAH8Q96JB1 4490 aa10.39□□□□□ -0.75
SMPD4-220ENST00000491319 A0A087WWC5 75 aa10.39□□□□□ -0.75
SMPD4-220ENST00000491319 A0A087WWL8 130 aa10.39□□□□□ -0.75
SMPD4-220ENST00000491319 TMSB15BA0A087X1C1 80 aa10.39□□□□□ -0.75
SMPD4-220ENST00000491319 ARPC5O15511 151 aa10.39□□□□□ -0.75
SMPD4-220ENST00000491319 CYTL1Q9NRR1 136 aa10.39□□□□□ -0.75
SMPD4-220ENST00000491319 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
SMPD4-220ENST00000491319 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
SMPD4-220ENST00000491319 M0R381 172 aa10.38□□□□□ -0.75
SMPD4-220ENST00000491319 LTAP01374 205 aa10.38□□□□□ -0.75
SMPD4-220ENST00000491319 ZNF674Q2M3X9 581 aa10.38□□□□□ -0.75
SMPD4-220ENST00000491319 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
SMPD4-220ENST00000491319 TOR2AQ5JU69 321 aa10.38□□□□□ -0.75
SMPD4-220ENST00000491319 SFRP2Q96HF1 295 aa10.38□□□□□ -0.75
SMPD4-220ENST00000491319 DNAJC30Q96LL9 226 aa10.38□□□□□ -0.75
SMPD4-220ENST00000491319 C1QBP02746 253 aa10.37□□□□□ -0.75
SMPD4-220ENST00000491319 TPT1P13693 172 aaKnown RBP10.37□□□□□ -0.75
SMPD4-220ENST00000491319 FHITP49789 147 aa10.37□□□□□ -0.75
SMPD4-220ENST00000491319 CST9LP1Q5W188 147 aa10.37□□□□□ -0.75
SMPD4-220ENST00000491319 NIT1Q86X76 327 aa10.37□□□□□ -0.75
SMPD4-220ENST00000491319 TRBV6-1A0A0K0K1D8 114 aa10.36□□□□□ -0.75
SMPD4-220ENST00000491319 AKR1C3P42330 323 aa10.36□□□□□ -0.75
SMPD4-220ENST00000491319 Q6ZSA8 131 aa10.36□□□□□ -0.75
SMPD4-220ENST00000491319 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
SMPD4-220ENST00000491319 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
SMPD4-220ENST00000491319 SMLR1H3BR10 107 aa10.35□□□□□ -0.75
SMPD4-220ENST00000491319 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
SMPD4-220ENST00000491319 ZFP82Q8N141 532 aa10.35□□□□□ -0.75
SMPD4-220ENST00000491319 TCEAL7Q9BRU2 100 aa10.35□□□□□ -0.75
SMPD4-220ENST00000491319 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
SMPD4-220ENST00000491319 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
SMPD4-220ENST00000491319 PAGE4O60829 102 aa10.34□□□□□ -0.75
SMPD4-220ENST00000491319 STOML3Q8TAV4 291 aa10.34□□□□□ -0.75
SMPD4-220ENST00000491319 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
SMPD4-220ENST00000491319 UBE2D3P61077 147 aa10.33□□□□□ -0.76
SMPD4-220ENST00000491319 UBE2D2P62837 147 aa10.33□□□□□ -0.76
SMPD4-220ENST00000491319 RPL36AP83881 106 aaKnown RBP10.33□□□□□ -0.76
SMPD4-220ENST00000491319 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
SMPD4-220ENST00000491319 RPL36ALQ969Q0 106 aaKnown RBP10.33□□□□□ -0.76
SMPD4-220ENST00000491319 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
SMPD4-220ENST00000491319 RMI2Q96E14 147 aa10.33□□□□□ -0.76
SMPD4-220ENST00000491319 A0A087WX48 190 aa10.32□□□□□ -0.76
SMPD4-220ENST00000491319 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
SMPD4-220ENST00000491319 A0A1B0GV50 99 aa10.32□□□□□ -0.76
SMPD4-220ENST00000491319 SCO2A0A1W2PP80 73 aa10.32□□□□□ -0.76
SMPD4-220ENST00000491319 LINC00528Q8N1L1 170 aa10.32□□□□□ -0.76
SMPD4-220ENST00000491319 TRBV7-3A0A075B6L6 115 aa10.31□□□□□ -0.76
SMPD4-220ENST00000491319 SEC11BP0C7V7 166 aa10.31□□□□□ -0.76
SMPD4-220ENST00000491319 RGS21Q2M5E4 152 aa10.31□□□□□ -0.76
SMPD4-220ENST00000491319 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
SMPD4-220ENST00000491319 FAM213BQ8TBF2 198 aa10.31□□□□□ -0.76
SMPD4-220ENST00000491319 CHCHD7Q9BUK0 85 aa10.31□□□□□ -0.76
SMPD4-220ENST00000491319 ZNF345Q14585 488 aa10.3□□□□□ -0.76
SMPD4-220ENST00000491319 ZNF56Q15929 161 aa10.3□□□□□ -0.76
SMPD4-220ENST00000491319 SCXQ7RTU7 201 aa10.3□□□□□ -0.76
SMPD4-220ENST00000491319 KCNRGQ8N5I3 272 aa10.3□□□□□ -0.76
SMPD4-220ENST00000491319 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
SMPD4-220ENST00000491319 SFT2D1Q8WV19 159 aa10.3□□□□□ -0.76
SMPD4-220ENST00000491319 RBFOX3A6NFN3 312 aa10.29□□□□□ -0.76
SMPD4-220ENST00000491319 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
SMPD4-220ENST00000491319 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
SMPD4-220ENST00000491319 ATRAIDQ6UW56 229 aa10.29□□□□□ -0.76
SMPD4-220ENST00000491319 Q8N976 141 aa10.29□□□□□ -0.76
SMPD4-220ENST00000491319 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
SMPD4-220ENST00000491319 MBD3L1Q8WWY6 194 aa10.29□□□□□ -0.76
SMPD4-220ENST00000491319 TRBV6-8A0A0A6YYG3 113 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 MUC21A0A0G2JKD1 596 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 MUC21A0A140T8X8 626 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 PFDN1O60925 122 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 CXCL1P09341 107 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 RAB4BP61018 213 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 ELOBQ15370 118 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
SMPD4-220ENST00000491319 UMAD1C9J7I0 102 aa10.27□□□□□ -0.77
SMPD4-220ENST00000491319 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
SMPD4-220ENST00000491319 SNAI2O43623 268 aa10.27□□□□□ -0.77
SMPD4-220ENST00000491319 S100A9P06702 114 aaKnown RBP10.27□□□□□ -0.77
SMPD4-220ENST00000491319 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
SMPD4-220ENST00000491319 PRR27Q6MZM9 219 aa10.27□□□□□ -0.77
SMPD4-220ENST00000491319 BAGE2Q86Y30 109 aa10.27□□□□□ -0.77
SMPD4-220ENST00000491319 ZNF471Q9BX82 626 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-220ENST00000491319 J3QL48 77 aa10.26□□□□□ -0.77
SMPD4-220ENST00000491319 Q0VG73 95 aa10.26□□□□□ -0.77
SMPD4-220ENST00000491319 ENHOQ6UWT2 76 aa10.26□□□□□ -0.77
SMPD4-220ENST00000491319 C15orf54Q8N8G6 183 aa10.26□□□□□ -0.77
SMPD4-220ENST00000491319 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-220ENST00000491319 C1orf43Q9BWL3 253 aa10.26□□□□□ -0.77
SMPD4-220ENST00000491319 BCL2L11O43521 198 aa10.25□□□□□ -0.77
SMPD4-220ENST00000491319 CRPP02741 224 aa10.25□□□□□ -0.77
SMPD4-220ENST00000491319 OR5AL1P0C617 328 aa10.25□□□□□ -0.77
SMPD4-220ENST00000491319 SSTP61278 116 aa10.25□□□□□ -0.77
SMPD4-220ENST00000491319 SPANXN1Q5VSR9 72 aa10.25□□□□□ -0.77
SMPD4-220ENST00000491319 KANTRA0A1W2PQU2 76 aa10.24□□□□□ -0.77
SMPD4-220ENST00000491319 F5H697 171 aa10.24□□□□□ -0.77
SMPD4-220ENST00000491319 ANGP03950 147 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms