RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	HAMP	P81172	84 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	ZC2HC1A	Q96GY0	325 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	SFRP2	Q96HF1	295 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	CHCHD7	Q9BUK0	85 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	JPT2	Q9H910	190 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	FXYD6-FXYD2	A0A087WZ82	144 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295	TRBV10-1	A0A0K0K1A3	114 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295	TPT1	P13693	172 aa	Known RBP	11.85	□□□□□ -0.51
GGA1-223	ENST00000491295	UBE2G1	P62253	170 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295	ELOB	Q15370	118 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295	NIT1	Q86X76	327 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295		Q8N3U1	123 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295		Q8N976	141 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295		Q9UF83	564 aa		11.85	□□□□□ -0.51
GGA1-223	ENST00000491295	SH2D1A	O60880	128 aa		11.84	□□□□□ -0.51
GGA1-223	ENST00000491295	WFDC2	Q14508	124 aa		11.84	□□□□□ -0.51
GGA1-223	ENST00000491295	ZNF674	Q2M3X9	581 aa		11.84	□□□□□ -0.51
GGA1-223	ENST00000491295	STOML3	Q8TAV4	291 aa		11.84	□□□□□ -0.51
GGA1-223	ENST00000491295	FLG2	Q5D862	2391 aa	Predicted RBP	11.83	□□□□□ -0.52
GGA1-223	ENST00000491295		M0R036	132 aa		11.83	□□□□□ -0.52
GGA1-223	ENST00000491295	LINC01559	Q495D7	138 aa		11.83	□□□□□ -0.52
GGA1-223	ENST00000491295	FAM74A4	Q5TZK3	123 aa		11.83	□□□□□ -0.52
GGA1-223	ENST00000491295	ZFP82	Q8N141	532 aa		11.83	□□□□□ -0.52
GGA1-223	ENST00000491295	MAP1LC3B2	A6NCE7	125 aa		11.82	□□□□□ -0.52
GGA1-223	ENST00000491295	RPL36A	P83881	106 aa	Known RBP	11.82	□□□□□ -0.52
GGA1-223	ENST00000491295	KCNIP4	Q6PIL6	250 aa		11.82	□□□□□ -0.52
GGA1-223	ENST00000491295	BAALC	Q8WXS3	180 aa		11.82	□□□□□ -0.52
GGA1-223	ENST00000491295	RPL36AL	Q969Q0	106 aa	Known RBP	11.82	□□□□□ -0.52
GGA1-223	ENST00000491295	MAP1LC3B	Q9GZQ8	125 aa		11.82	□□□□□ -0.52
GGA1-223	ENST00000491295	TRBV7-3	A0A075B6L6	115 aa		11.81	□□□□□ -0.52
GGA1-223	ENST00000491295		A0A087WX48	190 aa		11.81	□□□□□ -0.52
GGA1-223	ENST00000491295	GRIFIN	A4D1Z8	144 aa		11.81	□□□□□ -0.52
GGA1-223	ENST00000491295	LECT2	O14960	151 aa		11.81	□□□□□ -0.52
GGA1-223	ENST00000491295	LTA	P01374	205 aa		11.81	□□□□□ -0.52
GGA1-223	ENST00000491295	MYCBP2	O75592	4640 aa		11.81	□□□□□ -0.52
GGA1-223	ENST00000491295	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.8	□□□□□ -0.52
GGA1-223	ENST00000491295	IGKV2D-24	A0A075B6R9	120 aa		11.8	□□□□□ -0.52
GGA1-223	ENST00000491295		A0A087WWL8	130 aa		11.8	□□□□□ -0.52
GGA1-223	ENST00000491295		M0R381	172 aa		11.8	□□□□□ -0.52
GGA1-223	ENST00000491295	S100A9	P06702	114 aa	Known RBP	11.8	□□□□□ -0.52
GGA1-223	ENST00000491295		Q0VG73	95 aa		11.8	□□□□□ -0.52
GGA1-223	ENST00000491295	CST9LP1	Q5W188	147 aa		11.8	□□□□□ -0.52
GGA1-223	ENST00000491295	ATRAID	Q6UW56	229 aa		11.8	□□□□□ -0.52
GGA1-223	ENST00000491295	KLK12	Q9UKR0	248 aa		11.8	□□□□□ -0.52
GGA1-223	ENST00000491295	RBFOX3	A6NFN3	312 aa		11.79	□□□□□ -0.52
GGA1-223	ENST00000491295	UBE2D3	P61077	147 aa		11.79	□□□□□ -0.52
GGA1-223	ENST00000491295	UBE2D2	P62837	147 aa		11.79	□□□□□ -0.52
GGA1-223	ENST00000491295	DEFB104A	Q8WTQ1	72 aa		11.79	□□□□□ -0.52
GGA1-223	ENST00000491295		J3QL48	77 aa		11.78	□□□□□ -0.52
GGA1-223	ENST00000491295	CXCL1	P09341	107 aa		11.78	□□□□□ -0.52
GGA1-223	ENST00000491295	RAB4B	P61018	213 aa		11.78	□□□□□ -0.52
GGA1-223	ENST00000491295	LINC00528	Q8N1L1	170 aa		11.78	□□□□□ -0.52
GGA1-223	ENST00000491295	OR10G8	Q8NGN5	311 aa		11.78	□□□□□ -0.52
GGA1-223	ENST00000491295	CYTL1	Q9NRR1	136 aa		11.78	□□□□□ -0.52
GGA1-223	ENST00000491295	AKR1C3	P42330	323 aa		11.77	□□□□□ -0.53
GGA1-223	ENST00000491295	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.77	□□□□□ -0.53
GGA1-223	ENST00000491295	UBE2W	Q96B02	151 aa		11.77	□□□□□ -0.53
GGA1-223	ENST00000491295	TMSB15B	A0A087X1C1	80 aa		11.76	□□□□□ -0.53
GGA1-223	ENST00000491295		G3V3Q6	166 aa		11.76	□□□□□ -0.53
GGA1-223	ENST00000491295	ARPC5	O15511	151 aa		11.76	□□□□□ -0.53
GGA1-223	ENST00000491295	PKIA	P61925	76 aa		11.76	□□□□□ -0.53
GGA1-223	ENST00000491295	C14orf177	Q52M58	125 aa		11.76	□□□□□ -0.53
GGA1-223	ENST00000491295	TRBV6-8	A0A0A6YYG3	113 aa		11.75	□□□□□ -0.53
GGA1-223	ENST00000491295	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.75	□□□□□ -0.53
GGA1-223	ENST00000491295	UMAD1	C9J7I0	102 aa		11.75	□□□□□ -0.53
GGA1-223	ENST00000491295	CHAC1	Q9BUX1	264 aa		11.75	□□□□□ -0.53
GGA1-223	ENST00000491295	ZNF471	Q9BX82	626 aa	Predicted RBP	11.75	□□□□□ -0.53
GGA1-223	ENST00000491295	TMEM262	E9PQX1	116 aa		11.74	□□□□□ -0.53
GGA1-223	ENST00000491295	PAGE4	O60829	102 aa		11.74	□□□□□ -0.53
GGA1-223	ENST00000491295	MBD3L1	Q8WWY6	194 aa		11.74	□□□□□ -0.53
GGA1-223	ENST00000491295	MLST8	Q9BVC4	326 aa		11.74	□□□□□ -0.53
GGA1-223	ENST00000491295	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.74	□□□□□ -0.53
GGA1-223	ENST00000491295	C1orf43	Q9BWL3	253 aa		11.74	□□□□□ -0.53
GGA1-223	ENST00000491295	TMEM97	Q5BJF2	176 aa		11.73	□□□□□ -0.53
GGA1-223	ENST00000491295	PRR27	Q6MZM9	219 aa		11.73	□□□□□ -0.53
GGA1-223	ENST00000491295	SCX	Q7RTU7	201 aa		11.73	□□□□□ -0.53
GGA1-223	ENST00000491295	SFT2D1	Q8WV19	159 aa		11.73	□□□□□ -0.53
GGA1-223	ENST00000491295	DNAJC30	Q96LL9	226 aa		11.73	□□□□□ -0.53
GGA1-223	ENST00000491295	PFDN1	O60925	122 aa		11.72	□□□□□ -0.53
GGA1-223	ENST00000491295	OR5AL1	P0C617	328 aa		11.72	□□□□□ -0.53
GGA1-223	ENST00000491295	ZNF345	Q14585	488 aa		11.72	□□□□□ -0.53
GGA1-223	ENST00000491295	BAGE2	Q86Y30	109 aa		11.72	□□□□□ -0.53
GGA1-223	ENST00000491295	SNAI2	O43623	268 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	CRP	P02741	224 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	ZNF56	Q15929	161 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	RGS21	Q2M5E4	152 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	LINC01620	Q4KN68	170 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	KCNRG	Q8N5I3	272 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	NEXN-AS1	Q8NBZ9	246 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	OR10AG1	Q8NH19	301 aa		11.71	□□□□□ -0.53
GGA1-223	ENST00000491295	DNAH8	Q96JB1	4490 aa		11.7	□□□□□ -0.54
GGA1-223	ENST00000491295	SPANXN1	Q5VSR9	72 aa		11.7	□□□□□ -0.54
GGA1-223	ENST00000491295	ENHO	Q6UWT2	76 aa		11.7	□□□□□ -0.54
GGA1-223	ENST00000491295	MIA	Q16674	131 aa		11.69	□□□□□ -0.54
GGA1-223	ENST00000491295	FAM213B	Q8TBF2	198 aa		11.69	□□□□□ -0.54
GGA1-223	ENST00000491295	VAX2	Q9UIW0	290 aa		11.69	□□□□□ -0.54
GGA1-223	ENST00000491295		A0A0D9SG52	128 aa		11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	SCO2	A0A1W2PP80	73 aa		11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	HMSD	A8MTL9	139 aa		11.68	□□□□□ -0.54
GGA1-223	ENST00000491295	IGLV2-8	P01709	118 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms