RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 FAM162BQ5T6X4 162 aa9.05□□□□□ -0.96
COL6A3-211ENST00000491233 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
COL6A3-211ENST00000491233 FMC1Q96HJ9 113 aa9.05□□□□□ -0.96
COL6A3-211ENST00000491233 CYTL1Q9NRR1 136 aa9.05□□□□□ -0.96
COL6A3-211ENST00000491233 DNAH8Q96JB1 4490 aa9.05□□□□□ -0.96
COL6A3-211ENST00000491233 A0A087WWL8 130 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 M0R381 172 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 LECT2O14960 151 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 TPT1P13693 172 aaKnown RBP9.04□□□□□ -0.96
COL6A3-211ENST00000491233 AKR1C3P42330 323 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
COL6A3-211ENST00000491233 TRBV6-1A0A0K0K1D8 114 aa9.03□□□□□ -0.96
COL6A3-211ENST00000491233 LTAP01374 205 aa9.03□□□□□ -0.96
COL6A3-211ENST00000491233 ZNF674Q2M3X9 581 aa9.03□□□□□ -0.96
COL6A3-211ENST00000491233 ZFP82Q8N141 532 aa9.03□□□□□ -0.96
COL6A3-211ENST00000491233 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
COL6A3-211ENST00000491233 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
COL6A3-211ENST00000491233 TCEAL7Q9BRU2 100 aa9.03□□□□□ -0.96
COL6A3-211ENST00000491233 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-211ENST00000491233 SMLR1H3BR10 107 aa9.02□□□□□ -0.97
COL6A3-211ENST00000491233 FHITP49789 147 aa9.02□□□□□ -0.97
COL6A3-211ENST00000491233 URGCP-MRPS24S4R325 110 aa9.02□□□□□ -0.97
COL6A3-211ENST00000491233 HERC1Q15751 4861 aa9.02□□□□□ -0.97
COL6A3-211ENST00000491233 C1QBP02746 253 aa9.01□□□□□ -0.97
COL6A3-211ENST00000491233 RGS21Q2M5E4 152 aa9.01□□□□□ -0.97
COL6A3-211ENST00000491233 NIT1Q86X76 327 aa9.01□□□□□ -0.97
COL6A3-211ENST00000491233 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
COL6A3-211ENST00000491233 DNAJC30Q96LL9 226 aa9.01□□□□□ -0.97
COL6A3-211ENST00000491233 DMBT1Q9UGM3 2413 aaPredicted RBP9□□□□□ -0.97
COL6A3-211ENST00000491233 PAGE4O60829 102 aa9□□□□□ -0.97
COL6A3-211ENST00000491233 Q6ZSA8 131 aa9□□□□□ -0.97
COL6A3-211ENST00000491233 RMI2Q96E14 147 aa9□□□□□ -0.97
COL6A3-211ENST00000491233 KLK12Q9UKR0 248 aa9□□□□□ -0.97
COL6A3-211ENST00000491233 COX11Q9Y6N1 276 aa9□□□□□ -0.97
COL6A3-211ENST00000491233 FLG2Q5D862 2391 aaPredicted RBP9□□□□□ -0.97
COL6A3-211ENST00000491233 IGKV2D-24A0A075B6R9 120 aa8.99□□□□□ -0.97
COL6A3-211ENST00000491233 TRBV10-1A0A0K0K1A3 114 aa8.99□□□□□ -0.97
COL6A3-211ENST00000491233 A0A1B0GV50 99 aa8.99□□□□□ -0.97
COL6A3-211ENST00000491233 SEC11BP0C7V7 166 aa8.99□□□□□ -0.97
COL6A3-211ENST00000491233 UBE2D3P61077 147 aa8.99□□□□□ -0.97
COL6A3-211ENST00000491233 UBE2D2P62837 147 aa8.99□□□□□ -0.97
COL6A3-211ENST00000491233 RPL36AP83881 106 aaKnown RBP8.99□□□□□ -0.97
COL6A3-211ENST00000491233 RPL19P84098 196 aaKnown RBP8.99□□□□□ -0.97
COL6A3-211ENST00000491233 FAM213BQ8TBF2 198 aa8.99□□□□□ -0.97
COL6A3-211ENST00000491233 RPL36ALQ969Q0 106 aaKnown RBP8.99□□□□□ -0.97
COL6A3-211ENST00000491233 A0A087WX48 190 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 SCO2A0A1W2PP80 73 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 ZNF345Q14585 488 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 LINC01620Q4KN68 170 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 KCNRGQ8N5I3 272 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 OR10AG1Q8NH19 301 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 SFT2D1Q8WV19 159 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 UBE2WQ96B02 151 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 CHCHD7Q9BUK0 85 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
COL6A3-211ENST00000491233 TRBV7-3A0A075B6L6 115 aa8.97□□□□□ -0.97
COL6A3-211ENST00000491233 PFDN1O60925 122 aa8.97□□□□□ -0.97
COL6A3-211ENST00000491233 ZNF56Q15929 161 aa8.97□□□□□ -0.97
COL6A3-211ENST00000491233 KCNIP4Q6PIL6 250 aa8.97□□□□□ -0.97
COL6A3-211ENST00000491233 OR10G8Q8NGN5 311 aa8.97□□□□□ -0.97
COL6A3-211ENST00000491233 MBD3L1Q8WWY6 194 aa8.97□□□□□ -0.97
COL6A3-211ENST00000491233 UMAD1C9J7I0 102 aa8.96□□□□□ -0.98
COL6A3-211ENST00000491233 S100A9P06702 114 aaKnown RBP8.96□□□□□ -0.98
COL6A3-211ENST00000491233 CXCL1P09341 107 aa8.96□□□□□ -0.98
COL6A3-211ENST00000491233 ELOBQ15370 118 aa8.96□□□□□ -0.98
COL6A3-211ENST00000491233 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
COL6A3-211ENST00000491233 ZNF471Q9BX82 626 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-211ENST00000491233 RBFOX3A6NFN3 312 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 RAB4BP61018 213 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 PRR27Q6MZM9 219 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 ATRAIDQ6UW56 229 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 BAGE2Q86Y30 109 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 Q8N976 141 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 NEXN-AS1Q8NBZ9 246 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 MLST8Q9BVC4 326 aa8.95□□□□□ -0.98
COL6A3-211ENST00000491233 SRRM2Q9UQ35 2752 aaKnown RBP8.94□□□□□ -0.98
COL6A3-211ENST00000491233 TRBV6-8A0A0A6YYG3 113 aa8.94□□□□□ -0.98
COL6A3-211ENST00000491233 MUC21A0A0G2JKD1 596 aa8.94□□□□□ -0.98
COL6A3-211ENST00000491233 MUC21A0A140T8X8 626 aa8.94□□□□□ -0.98
COL6A3-211ENST00000491233 KANTRA0A1W2PQU2 76 aa8.94□□□□□ -0.98
COL6A3-211ENST00000491233 BCL2L11O43521 198 aa8.94□□□□□ -0.98
COL6A3-211ENST00000491233 SNAI2O43623 268 aa8.94□□□□□ -0.98
COL6A3-211ENST00000491233 PLA2G1BP04054 148 aaKnown RBP8.94□□□□□ -0.98
COL6A3-211ENST00000491233 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
COL6A3-211ENST00000491233 HMSDA8MTL9 139 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 TMEM262E9PQX1 116 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 CRPP02741 224 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 Q0VG73 95 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 MPV17L2Q567V2 206 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 SPANXN1Q5VSR9 72 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 C1orf43Q9BWL3 253 aa8.93□□□□□ -0.98
COL6A3-211ENST00000491233 A0A0D9SG52 128 aa8.92□□□□□ -0.98
COL6A3-211ENST00000491233 H2AFB1P0C5Y9 115 aa8.92□□□□□ -0.98
COL6A3-211ENST00000491233 SSTP61278 116 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms