RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 SYT8Q8NBV8 401 aa18.5■□□□□ 0.55
HOXB3-211ENST00000490677 TMSB15BA0A087X1C1 80 aa18.49■□□□□ 0.55
HOXB3-211ENST00000490677 EPM2AB3EWF7 344 aa18.49■□□□□ 0.55
HOXB3-211ENST00000490677 AKR1C3P42330 323 aa18.49■□□□□ 0.55
HOXB3-211ENST00000490677 UMAD1C9J7I0 102 aa18.48■□□□□ 0.55
HOXB3-211ENST00000490677 WFDC2Q14508 124 aa18.48■□□□□ 0.55
HOXB3-211ENST00000490677 FAM213BQ8TBF2 198 aa18.48■□□□□ 0.55
HOXB3-211ENST00000490677 NTN5Q8WTR8 489 aaPredicted RBP18.48■□□□□ 0.55
HOXB3-211ENST00000490677 SFT2D1Q8WV19 159 aa18.48■□□□□ 0.55
HOXB3-211ENST00000490677 MLST8Q9BVC4 326 aa18.48■□□□□ 0.55
HOXB3-211ENST00000490677 PHLDA3Q9Y5J5 127 aa18.48■□□□□ 0.55
HOXB3-211ENST00000490677 A0A087WWL8 130 aa18.47■□□□□ 0.55
HOXB3-211ENST00000490677 FAM74A4Q5TZK3 123 aa18.47■□□□□ 0.55
HOXB3-211ENST00000490677 DAZ4Q86SG3 579 aaKnown RBP18.47■□□□□ 0.55
HOXB3-211ENST00000490677 DAZ3Q9NR90 486 aaKnown RBP18.47■□□□□ 0.55
HOXB3-211ENST00000490677 SCO2A0A1W2PP80 73 aa18.46■□□□□ 0.55
HOXB3-211ENST00000490677 BCL2L11O43521 198 aa18.46■□□□□ 0.55
HOXB3-211ENST00000490677 IGLV5-52A0A0A0MRZ9 124 aa18.45■□□□□ 0.54
HOXB3-211ENST00000490677 A0A0D9SG52 128 aa18.45■□□□□ 0.54
HOXB3-211ENST00000490677 A0A1B0GV50 99 aa18.45■□□□□ 0.54
HOXB3-211ENST00000490677 M0R381 172 aa18.45■□□□□ 0.54
HOXB3-211ENST00000490677 TPT1P13693 172 aaKnown RBP18.45■□□□□ 0.54
HOXB3-211ENST00000490677 ZNF471Q9BX82 626 aaPredicted RBP18.45■□□□□ 0.54
HOXB3-211ENST00000490677 A0A087WWC5 75 aa18.44■□□□□ 0.54
HOXB3-211ENST00000490677 RPL19P84098 196 aaKnown RBP18.44■□□□□ 0.54
HOXB3-211ENST00000490677 ZFP82Q8N141 532 aa18.44■□□□□ 0.54
HOXB3-211ENST00000490677 HERC1Q15751 4861 aa18.44■□□□□ 0.54
HOXB3-211ENST00000490677 SRRM2Q9UQ35 2752 aaKnown RBP18.43■□□□□ 0.54
HOXB3-211ENST00000490677 S100A9P06702 114 aaKnown RBP18.42■□□□□ 0.54
HOXB3-211ENST00000490677 HAMPP81172 84 aa18.42■□□□□ 0.54
HOXB3-211ENST00000490677 Q5VSD8 79 aa18.42■□□□□ 0.54
HOXB3-211ENST00000490677 CXCL1P09341 107 aa18.41■□□□□ 0.54
HOXB3-211ENST00000490677 NIT1Q86X76 327 aa18.41■□□□□ 0.54
HOXB3-211ENST00000490677 DNAJC30Q96LL9 226 aa18.41■□□□□ 0.54
HOXB3-211ENST00000490677 TMEM70Q9BUB7 260 aa18.41■□□□□ 0.54
HOXB3-211ENST00000490677 MYCBP2O75592 4640 aa18.41■□□□□ 0.54
HOXB3-211ENST00000490677 TRAV8-3A0A0A6YYJ7 113 aa18.4■□□□□ 0.54
HOXB3-211ENST00000490677 KANTRA0A1W2PQU2 76 aa18.4■□□□□ 0.54
HOXB3-211ENST00000490677 OR10AG1Q8NH19 301 aa18.4■□□□□ 0.54
HOXB3-211ENST00000490677 TM2D2Q9BX73 214 aa18.4■□□□□ 0.54
HOXB3-211ENST00000490677 TRBV10-1A0A0K0K1A3 114 aa18.39■□□□□ 0.53
HOXB3-211ENST00000490677 H2AFB1P0C5Y9 115 aa18.39■□□□□ 0.53
HOXB3-211ENST00000490677 UBE2D3P61077 147 aa18.39■□□□□ 0.53
HOXB3-211ENST00000490677 UBE2D2P62837 147 aa18.39■□□□□ 0.53
HOXB3-211ENST00000490677 SSBP4Q9BWG4 385 aaPredicted RBP18.39■□□□□ 0.53
HOXB3-211ENST00000490677 FAM30AQ9NZY2 134 aa18.39■□□□□ 0.53
HOXB3-211ENST00000490677 SNAI2O43623 268 aa18.38■□□□□ 0.53
HOXB3-211ENST00000490677 SMR3BP02814 79 aaPredicted RBP18.38■□□□□ 0.53
HOXB3-211ENST00000490677 CCL20P78556 96 aa18.38■□□□□ 0.53
HOXB3-211ENST00000490677 TMUB2Q71RG4 321 aa18.38■□□□□ 0.53
HOXB3-211ENST00000490677 BAGE2Q86Y30 109 aa18.38■□□□□ 0.53
HOXB3-211ENST00000490677 OR10G8Q8NGN5 311 aa18.38■□□□□ 0.53
HOXB3-211ENST00000490677 PRR27Q6MZM9 219 aa18.37■□□□□ 0.53
HOXB3-211ENST00000490677 PFDN1O60925 122 aa18.36■□□□□ 0.53
HOXB3-211ENST00000490677 TRBV7-3A0A075B6L6 115 aa18.35■□□□□ 0.53
HOXB3-211ENST00000490677 FRZBQ92765 325 aa18.35■□□□□ 0.53
HOXB3-211ENST00000490677 DERL1Q9BUN8 251 aa18.35■□□□□ 0.53
HOXB3-211ENST00000490677 LECT2O14960 151 aa18.34■□□□□ 0.53
HOXB3-211ENST00000490677 RAB4BP61018 213 aa18.34■□□□□ 0.53
HOXB3-211ENST00000490677 TOR2AQ5JU69 321 aa18.34■□□□□ 0.53
HOXB3-211ENST00000490677 C11orf52Q96A22 123 aa18.34■□□□□ 0.53
HOXB3-211ENST00000490677 OR5AL1P0C617 328 aa18.33■□□□□ 0.52
HOXB3-211ENST00000490677 INAFM2P0DMQ5 153 aa18.33■□□□□ 0.52
HOXB3-211ENST00000490677 RPL35P42766 123 aaKnown RBP18.33■□□□□ 0.52
HOXB3-211ENST00000490677 RPL36AP83881 106 aaKnown RBP18.33■□□□□ 0.52
HOXB3-211ENST00000490677 NEXN-AS1Q8NBZ9 246 aa18.33■□□□□ 0.52
HOXB3-211ENST00000490677 RPL36ALQ969Q0 106 aaKnown RBP18.33■□□□□ 0.52
HOXB3-211ENST00000490677 FLG2Q5D862 2391 aaPredicted RBP18.33■□□□□ 0.52
HOXB3-211ENST00000490677 TRAV1-1A0A0B4J248 108 aa18.32■□□□□ 0.52
HOXB3-211ENST00000490677 C1QBP02746 253 aa18.32■□□□□ 0.52
HOXB3-211ENST00000490677 EIF5AP63241 154 aaKnown RBP18.32■□□□□ 0.52
HOXB3-211ENST00000490677 Q6ZSA8 131 aa18.32■□□□□ 0.52
HOXB3-211ENST00000490677 KIF25-AS1Q9Y6Z4 181 aa18.32■□□□□ 0.52
HOXB3-211ENST00000490677 MUC21A0A0G2JKD1 596 aa18.31■□□□□ 0.52
HOXB3-211ENST00000490677 MUC21A0A140T8X8 626 aa18.31■□□□□ 0.52
HOXB3-211ENST00000490677 IGLV2-8P01709 118 aa18.31■□□□□ 0.52
HOXB3-211ENST00000490677 CHCHD7Q9BUK0 85 aa18.31■□□□□ 0.52
HOXB3-211ENST00000490677 KLK12Q9UKR0 248 aa18.31■□□□□ 0.52
HOXB3-211ENST00000490677 ATRAIDQ6UW56 229 aa18.3■□□□□ 0.52
HOXB3-211ENST00000490677 BAALCQ8WXS3 180 aa18.3■□□□□ 0.52
HOXB3-211ENST00000490677 MANBALQ9NQG1 85 aa18.29■□□□□ 0.52
HOXB3-211ENST00000490677 GNG13Q9P2W3 67 aa18.29■□□□□ 0.52
HOXB3-211ENST00000490677 URGCP-MRPS24S4R325 110 aa18.29■□□□□ 0.52
HOXB3-211ENST00000490677 ZNF56Q15929 161 aa18.28■□□□□ 0.52
HOXB3-211ENST00000490677 COX11Q9Y6N1 276 aa18.28■□□□□ 0.52
HOXB3-211ENST00000490677 DMBT1Q9UGM3 2413 aaPredicted RBP18.28■□□□□ 0.52
HOXB3-211ENST00000490677 TRBV6-8A0A0A6YYG3 113 aa18.27■□□□□ 0.52
HOXB3-211ENST00000490677 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.25■□□□□ 0.51
HOXB3-211ENST00000490677 A0A087WX48 190 aa18.25■□□□□ 0.51
HOXB3-211ENST00000490677 IGLC6P0CF74 106 aa18.25■□□□□ 0.51
HOXB3-211ENST00000490677 CENPWQ5EE01 88 aa18.25■□□□□ 0.51
HOXB3-211ENST00000490677 SPANXN1Q5VSR9 72 aa18.25■□□□□ 0.51
HOXB3-211ENST00000490677 UBE2WQ96B02 151 aa18.25■□□□□ 0.51
HOXB3-211ENST00000490677 IGKV2D-24A0A075B6R9 120 aa18.24■□□□□ 0.51
HOXB3-211ENST00000490677 SULT1A2P50226 295 aa18.24■□□□□ 0.51
HOXB3-211ENST00000490677 RAB5CP51148 216 aa18.24■□□□□ 0.51
HOXB3-211ENST00000490677 RMI2Q96E14 147 aa18.24■□□□□ 0.51
HOXB3-211ENST00000490677 C19orf71A6NCJ1 209 aa18.23■□□□□ 0.51
HOXB3-211ENST00000490677 ENHOQ6UWT2 76 aa18.23■□□□□ 0.51
HOXB3-211ENST00000490677 NTM-AS1Q6ZSK4 140 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms