RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 D6R8Y8 96 aa8.6□□□□□ -1.03
TRIM40-208ENST00000489892 DLEU1O43261 78 aa8.6□□□□□ -1.03
TRIM40-208ENST00000489892 CD7P09564 240 aa8.6□□□□□ -1.03
TRIM40-208ENST00000489892 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
TRIM40-208ENST00000489892 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
TRIM40-208ENST00000489892 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
TRIM40-208ENST00000489892 TPPP3Q9BW30 176 aa8.6□□□□□ -1.03
TRIM40-208ENST00000489892 NXT2Q9NPJ8 142 aaKnown RBP8.6□□□□□ -1.03
TRIM40-208ENST00000489892 TRGV11A0A075B6L2 103 aa8.59□□□□□ -1.03
TRIM40-208ENST00000489892 J3KRW8 73 aa8.59□□□□□ -1.03
TRIM40-208ENST00000489892 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
TRIM40-208ENST00000489892 S100A4P26447 101 aaKnown RBP8.59□□□□□ -1.03
TRIM40-208ENST00000489892 CKS2P33552 79 aa8.59□□□□□ -1.03
TRIM40-208ENST00000489892 ASIPP42127 132 aa8.59□□□□□ -1.03
TRIM40-208ENST00000489892 TWIST1Q15672 202 aa8.59□□□□□ -1.03
TRIM40-208ENST00000489892 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
TRIM40-208ENST00000489892 C19orf73Q9NVV2 129 aa8.59□□□□□ -1.03
TRIM40-208ENST00000489892 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 PRR9Q5T870 116 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 ATOH7Q8N100 152 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 DEFB125Q8N687 156 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 ORAOV1Q8WV07 137 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 LINC00467Q9BRT7 94 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 SCRT2Q9NQ03 307 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 GOLT1BQ9Y3E0 138 aa8.58□□□□□ -1.04
TRIM40-208ENST00000489892 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 TMSB15BA0A087X1C1 80 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 IGKV3D-20A0A0C4DH25 116 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 PRSS47A8MTI9 375 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 APOC4P55056 127 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 EGFEM1PQ0D2K5 195 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 BATFQ16520 125 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 AMN1Q8IY45 258 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 KIR2DL5BQ8NHK3 375 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 TMEM208Q9BTX3 173 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 EPPK1P58107 5090 aaKnown RBP8.57□□□□□ -1.04
TRIM40-208ENST00000489892 AGRNO00468 2067 aa8.57□□□□□ -1.04
TRIM40-208ENST00000489892 TRAV12-2A0A075B6T6 113 aa8.56□□□□□ -1.04
TRIM40-208ENST00000489892 SNAI2O43623 268 aa8.56□□□□□ -1.04
TRIM40-208ENST00000489892 COX8AP10176 69 aa8.56□□□□□ -1.04
TRIM40-208ENST00000489892 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
TRIM40-208ENST00000489892 ZNF124Q15973 351 aa8.56□□□□□ -1.04
TRIM40-208ENST00000489892 ANXA2RQ3ZCQ2 193 aa8.56□□□□□ -1.04
TRIM40-208ENST00000489892 RBMY1BA6NDE4 496 aaKnown RBP8.55□□□□□ -1.04
TRIM40-208ENST00000489892 RBMY1EA6NEQ0 496 aaKnown RBP8.55□□□□□ -1.04
TRIM40-208ENST00000489892 CBY3A6NI87 242 aa8.55□□□□□ -1.04
TRIM40-208ENST00000489892 K7EMI3 77 aa8.55□□□□□ -1.04
TRIM40-208ENST00000489892 RBMY1DP0C7P1 496 aaKnown RBP8.55□□□□□ -1.04
TRIM40-208ENST00000489892 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
TRIM40-208ENST00000489892 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
TRIM40-208ENST00000489892 MRAP2Q96G30 205 aa8.55□□□□□ -1.04
TRIM40-208ENST00000489892 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
TRIM40-208ENST00000489892 PHLDA3Q9Y5J5 127 aa8.55□□□□□ -1.04
TRIM40-208ENST00000489892 SIVA1O15304 175 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 RPL35AP18077 110 aaKnown RBP8.54□□□□□ -1.04
TRIM40-208ENST00000489892 SPANXN1Q5VSR9 72 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 LINC00173Q6ZV60 143 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 Q8N8P6 123 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 LINC01587Q99440 93 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 XCL2Q9UBD3 114 aa8.54□□□□□ -1.04
TRIM40-208ENST00000489892 A0A096LNJ9 63 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 ATP5LO75964 103 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 PPP1R17O96001 155 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 NPYP01303 97 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 FCER1GP30273 86 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 FXYD7P58549 80 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 ZNF415Q09FC8 603 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 KIR3DS1Q14943 382 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 MAJINQ3KP22 176 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 OXLD1Q5BKU9 147 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 STPG4Q8N801 248 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
TRIM40-208ENST00000489892 hDV102S1A0JD36 115 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 A8MZ25 164 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 H3BVH4 76 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 G0S2P27469 103 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 HINT1P49773 126 aaPredicted RBP8.52□□□□□ -1.05
TRIM40-208ENST00000489892 SEC11AP67812 179 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 Q8N1Y9 231 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 SPXQ9BT56 116 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 WFDC10AQ9H1F0 79 aa8.52□□□□□ -1.05
TRIM40-208ENST00000489892 IGHV3-16A0A0C4DH30 117 aa8.51□□□□□ -1.05
TRIM40-208ENST00000489892 SMIM9A6NGZ8 99 aa8.51□□□□□ -1.05
TRIM40-208ENST00000489892 M0R381 172 aa8.51□□□□□ -1.05
TRIM40-208ENST00000489892 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
TRIM40-208ENST00000489892 SAMD5Q5TGI4 173 aa8.51□□□□□ -1.05
TRIM40-208ENST00000489892 PTH2Q96A98 100 aa8.51□□□□□ -1.05
TRIM40-208ENST00000489892 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
TRIM40-208ENST00000489892 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
TRIM40-208ENST00000489892 NXPH4O95158 308 aa8.5□□□□□ -1.05
TRIM40-208ENST00000489892 RNASE3P12724 160 aaKnown RBP8.5□□□□□ -1.05
TRIM40-208ENST00000489892 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms