RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 IGHV3OR16-12A0A075B7B8 117 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 IGHV4-28A0A0C4DH34 117 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 PRSS47A8MTI9 375 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 APCSP02743 223 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 PRM2P04554 102 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 RAB4AP20338 218 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 EVI2AP22794 236 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 LCE2DQ5TA82 110 aaPredicted RBP7.64□□□□□ -1.19
USP11-209ENST00000488848 CFAP126Q5VTH2 177 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 SPATA25Q9BR10 227 aa7.64□□□□□ -1.19
USP11-209ENST00000488848 C1orf196B1AJZ1 125 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BKO60814 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BJP06899 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BOP23527 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BBP33778 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BDP58876 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BCP62807 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 RPL32P62910 135 aaKnown RBP7.63□□□□□ -1.19
USP11-209ENST00000488848 FABP9Q0Z7S8 132 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST2H2BEQ16778 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 MRPL51Q4U2R6 128 aaKnown RBP7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.63□□□□□ -1.19
USP11-209ENST00000488848 SBSPONQ8IVN8 264 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 AMN1Q8IY45 258 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BHQ93079 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BNQ99877 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 HIST1H2BMQ99879 126 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 B9D2Q9BPU9 175 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
USP11-209ENST00000488848 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
USP11-209ENST00000488848 MUC21A0A0G2JKD1 596 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 MUC21A0A140T8X8 626 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 PPP1R17O96001 155 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 HTN1P15515 57 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 RAB5BP61020 215 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 Q0VG73 95 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 Q6ZTI0 123 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 ORMDL3Q8N138 153 aa7.62□□□□□ -1.19
USP11-209ENST00000488848 NOP10Q9NPE3 64 aaKnown RBP7.62□□□□□ -1.19
USP11-209ENST00000488848 TRBV6-5A0A0K0K1A5 114 aa7.61□□□□□ -1.19
USP11-209ENST00000488848 IGHV3-53P01767 116 aa7.61□□□□□ -1.19
USP11-209ENST00000488848 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
USP11-209ENST00000488848 RAB4BP61018 213 aa7.61□□□□□ -1.19
USP11-209ENST00000488848 OR10J3Q5JRS4 329 aa7.61□□□□□ -1.19
USP11-209ENST00000488848 C14orf178Q8N769 122 aaPredicted RBP7.61□□□□□ -1.19
USP11-209ENST00000488848 NRACQ8N912 160 aa7.61□□□□□ -1.19
USP11-209ENST00000488848 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.61□□□□□ -1.19
USP11-209ENST00000488848 TRGV1A0A0A0MS02 117 aa7.6□□□□□ -1.19
USP11-209ENST00000488848 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
USP11-209ENST00000488848 M0QY20 66 aa7.6□□□□□ -1.19
USP11-209ENST00000488848 ESDP10768 282 aa7.6□□□□□ -1.19
USP11-209ENST00000488848 C20orf78Q9BR46 151 aa7.6□□□□□ -1.19
USP11-209ENST00000488848 SAMD10Q9BYL1 202 aa7.6□□□□□ -1.19
USP11-209ENST00000488848 JPT2Q9H910 190 aa7.6□□□□□ -1.19
USP11-209ENST00000488848 MRPL16Q9NX20 251 aaKnown RBP7.6□□□□□ -1.19
USP11-209ENST00000488848 TRBV10-1A0A0K0K1A3 114 aa7.59□□□□□ -1.19
USP11-209ENST00000488848 D6R8Y8 96 aa7.59□□□□□ -1.19
USP11-209ENST00000488848 H7C1H1 209 aa7.59□□□□□ -1.19
USP11-209ENST00000488848 PRB2P02812 416 aaPredicted RBP7.59□□□□□ -1.19
USP11-209ENST00000488848 NHLRC4P0CG21 123 aaPredicted RBP7.59□□□□□ -1.19
USP11-209ENST00000488848 SPART-AS1P0CW21 52 aa7.59□□□□□ -1.19
USP11-209ENST00000488848 GATA1P15976 413 aaPredicted RBP7.59□□□□□ -1.19
USP11-209ENST00000488848 SRIP30626 198 aa7.59□□□□□ -1.19
USP11-209ENST00000488848 FAM222AQ5U5X8 452 aa7.59□□□□□ -1.19
USP11-209ENST00000488848 C18orf32Q8TCD1 76 aa7.59□□□□□ -1.19
USP11-209ENST00000488848 TRBV6-4A0A1B0GX49 114 aa7.58□□□□□ -1.2
USP11-209ENST00000488848 K7EMI3 77 aa7.58□□□□□ -1.2
USP11-209ENST00000488848 CKS2P33552 79 aa7.58□□□□□ -1.2
USP11-209ENST00000488848 SUMO4Q6EEV6 95 aa7.58□□□□□ -1.2
USP11-209ENST00000488848 OR4C5Q8NGB2 326 aa7.58□□□□□ -1.2
USP11-209ENST00000488848 MRAPQ8TCY5 172 aa7.58□□□□□ -1.2
USP11-209ENST00000488848 PRELID3AQ96N28 172 aa7.58□□□□□ -1.2
USP11-209ENST00000488848 IGLV2-18A0A075B6J9 118 aa7.57□□□□□ -1.2
USP11-209ENST00000488848 A0A087WWL8 130 aa7.57□□□□□ -1.2
USP11-209ENST00000488848 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
USP11-209ENST00000488848 ZNF479Q96JC4 524 aa7.57□□□□□ -1.2
USP11-209ENST00000488848 DNAJC30Q96LL9 226 aa7.57□□□□□ -1.2
USP11-209ENST00000488848 TRGV2A0A075B6R0 118 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 TRBV27A0A0K0K1C4 114 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 TNFRSF6BO95407 300 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 NPYP01303 97 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
USP11-209ENST00000488848 LINC00310P59036 64 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 FHL2Q14192 279 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 KIAA1644Q3SXP7 199 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 PACRGQ96M98 296 aaPredicted RBP7.56□□□□□ -1.2
USP11-209ENST00000488848 KRTAP17-1Q9BYP8 105 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 ZMAT4Q9H898 229 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 RETNQ9HD89 108 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 NIT2Q9NQR4 276 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
USP11-209ENST00000488848 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 C5orf52A6NGY3 159 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 H3BNG1 76 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 GAGE7O76087 117 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms