RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 C11orf1Q9H5F2 150 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 KCNIP2Q9NS61 270 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 OR5AC2Q9NZP5 309 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 IGKV2-24A0A0C4DH68 120 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 FAM231BA6NCW3 169 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 NAP1L6A6NFF2 107 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 UBE2D3P61077 147 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 UBE2D2P62837 147 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 COX6A2Q02221 97 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 NHLH2Q02577 135 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 PIK3CD-AS1Q5SR53 167 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 LINC00269Q8N2A0 174 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 ARL6IP6Q8N6S5 226 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 VAX2Q9UIW0 290 aa5.78□□□□□ -1.48
COL17A1-207ENST00000488320 TRBV10-1A0A0K0K1A3 114 aa5.77□□□□□ -1.49
COL17A1-207ENST00000488320 K7EQM0 130 aa5.77□□□□□ -1.49
COL17A1-207ENST00000488320 EIF3GO75821 320 aaKnown RBP eCLIP5.77□□□□□ -1.49
COL17A1-207ENST00000488320 PTTG1O95997 202 aa5.77□□□□□ -1.49
COL17A1-207ENST00000488320 IFNA7P01567 189 aa5.77□□□□□ -1.49
COL17A1-207ENST00000488320 PRNTQ86SH4 94 aa5.77□□□□□ -1.49
COL17A1-207ENST00000488320 OR5C1Q8NGR4 320 aa5.77□□□□□ -1.49
COL17A1-207ENST00000488320 PSG8Q9UQ74 426 aa5.77□□□□□ -1.49
COL17A1-207ENST00000488320 TRAV26-2A0A0B4J265 109 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 MUC21A0A0G2JKD1 596 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 CENPXA8MT69 81 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 SLPIP03973 132 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 RAB5CP51148 216 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 GAGE6Q13070 117 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 SRSF9Q13242 221 aaKnown RBP eCLIP5.76□□□□□ -1.49
COL17A1-207ENST00000488320 RAB32Q13637 225 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 KRTAP26-1Q6PEX3 210 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 OR11H4Q8NGC9 324 aa5.76□□□□□ -1.49
COL17A1-207ENST00000488320 WDR61Q9GZS3 305 aaKnown RBP5.76□□□□□ -1.49
COL17A1-207ENST00000488320 IGKV3D-20A0A0C4DH25 116 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 SERTM2A0A1B0GWG4 89 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 H3BVH4 76 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 NDUFS6O75380 124 aaKnown RBP5.75□□□□□ -1.49
COL17A1-207ENST00000488320 S100A5P33763 92 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 RBX1P62877 108 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 PRR4Q16378 134 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 TRIQKQ629K1 86 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 Q6ZRP5 223 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 PRSS3P2Q8NHM4 247 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 SFRP2Q96HF1 295 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 PRR34Q9NV39 138 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 IL36BQ9NZH7 164 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 PHLDA3Q9Y5J5 127 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 V9GYH0 126 aa5.75□□□□□ -1.49
COL17A1-207ENST00000488320 A0A1W2PPV4 95 aa5.74□□□□□ -1.49
COL17A1-207ENST00000488320 FABP5P3A8MUU1 101 aa5.74□□□□□ -1.49
COL17A1-207ENST00000488320 B4DEV8 164 aa5.74□□□□□ -1.49
COL17A1-207ENST00000488320 H3BMQ9 156 aa5.74□□□□□ -1.49
COL17A1-207ENST00000488320 NOL3O60936 208 aaKnown RBP5.74□□□□□ -1.49
COL17A1-207ENST00000488320 ARMS2P0C7Q2 107 aa5.74□□□□□ -1.49
COL17A1-207ENST00000488320 RPS10P46783 165 aaKnown RBP5.74□□□□□ -1.49
COL17A1-207ENST00000488320 FLI1Q01543 452 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-207ENST00000488320 REG3AQ06141 175 aa5.74□□□□□ -1.49
COL17A1-207ENST00000488320 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
COL17A1-207ENST00000488320 TRAV8-4A0A0B4J246 113 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 GRIFINA4D1Z8 144 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 M0R381 172 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 P01737 135 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 TCRAP04437 139 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 TPT1P13693 172 aaKnown RBP5.73□□□□□ -1.49
COL17A1-207ENST00000488320 CNPY1Q3B7I2 92 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 TMEM97Q5BJF2 176 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 SAPCD1Q5SSQ6 148 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 PQLC2Q6ZP29 291 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 ZNF664Q8N3J9 261 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 OR10G8Q8NGN5 311 aa5.73□□□□□ -1.49
COL17A1-207ENST00000488320 HMGB3O15347 200 aaKnown RBP5.72□□□□□ -1.49
COL17A1-207ENST00000488320 GZMBP10144 247 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 TMBIM6P55061 237 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 CACNG7P62955 275 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 CFAP161Q6P656 301 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 NEXN-AS1Q8NBZ9 246 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 SCGB1C1Q8TD33 95 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 DERL1Q9BUN8 251 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 PSORS1C2Q9UIG4 136 aa5.72□□□□□ -1.49
COL17A1-207ENST00000488320 TRBV25-1A0A075B6N4 114 aa5.71□□□□□ -1.5
COL17A1-207ENST00000488320 M0R036 132 aa5.71□□□□□ -1.5
COL17A1-207ENST00000488320 RAB4BP61018 213 aa5.71□□□□□ -1.5
COL17A1-207ENST00000488320 ZNF56Q15929 161 aa5.71□□□□□ -1.5
COL17A1-207ENST00000488320 ZFP82Q8N141 532 aa5.71□□□□□ -1.5
COL17A1-207ENST00000488320 C5orf17Q8NAS9 161 aa5.71□□□□□ -1.5
COL17A1-207ENST00000488320 SEC22CQ9BRL7 303 aa5.71□□□□□ -1.5
COL17A1-207ENST00000488320 A0A096LNI7 61 aa5.7□□□□□ -1.5
COL17A1-207ENST00000488320 SUMO1P63165 101 aaKnown RBP5.7□□□□□ -1.5
COL17A1-207ENST00000488320 IL15RAQ13261 267 aa5.7□□□□□ -1.5
COL17A1-207ENST00000488320 HIGD2BQ4VC39 106 aa5.7□□□□□ -1.5
COL17A1-207ENST00000488320 NTM-AS1Q6ZSK4 140 aa5.7□□□□□ -1.5
COL17A1-207ENST00000488320 LINC00474Q9P2X8 69 aa5.7□□□□□ -1.5
COL17A1-207ENST00000488320 EPDR1Q9UM22 224 aa5.7□□□□□ -1.5
COL17A1-207ENST00000488320 TRAV6A0A075B6T7 132 aa5.69□□□□□ -1.5
COL17A1-207ENST00000488320 TMSB15BA0A087X1C1 80 aa5.69□□□□□ -1.5
COL17A1-207ENST00000488320 KRBOX1C9JBD0 128 aa5.69□□□□□ -1.5
COL17A1-207ENST00000488320 F5H697 171 aa5.69□□□□□ -1.5
COL17A1-207ENST00000488320 BTCP35070 178 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms