RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 TCAPO15273 167 aa11.8□□□□□ -0.52
RAPGEF3-211ENST00000488250 CD300EQ496F6 205 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF3-211ENST00000488250 CLUHP3Q96NS8 147 aa11.8□□□□□ -0.52
RAPGEF3-211ENST00000488250 ZMAT4Q9H898 229 aa11.8□□□□□ -0.52
RAPGEF3-211ENST00000488250 ZNF256Q9Y2P7 627 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF3-211ENST00000488250 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 COX8AP10176 69 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 ODF1Q14990 250 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 CITED2Q99967 270 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 AGRNO00468 2067 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 ACANP16112 2415 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 NDUFA7O95182 113 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 NUDT3O95989 172 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 RBMY1A1P0DJD3 496 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 RBMY1CP0DJD4 496 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 RBMY1FQ15415 496 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 JPT2Q9H910 190 aa11.78□□□□□ -0.52
RAPGEF3-211ENST00000488250 HIST2H2BDQ6DRA6 164 aa11.77□□□□□ -0.53
RAPGEF3-211ENST00000488250 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
RAPGEF3-211ENST00000488250 PRSS1P07477 247 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 TOMM6Q96B49 74 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 LINC00467Q9BRT7 94 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 DKK2Q9UBU2 259 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 A0A1W2PRX2 142 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 CRYGDP07320 174 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 C11orf44Q8N8P7 122 aa11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
RAPGEF3-211ENST00000488250 A0A087WWL8 130 aa11.75□□□□□ -0.53
RAPGEF3-211ENST00000488250 CBY3A6NI87 242 aa11.75□□□□□ -0.53
RAPGEF3-211ENST00000488250 POLR2KP53803 58 aaKnown RBP11.75□□□□□ -0.53
RAPGEF3-211ENST00000488250 ZNF124Q15973 351 aa11.75□□□□□ -0.53
RAPGEF3-211ENST00000488250 ANKRD39Q53RE8 183 aa11.75□□□□□ -0.53
RAPGEF3-211ENST00000488250 CSTL1Q9H114 145 aa11.75□□□□□ -0.53
RAPGEF3-211ENST00000488250 SORL1Q92673 2214 aa11.75□□□□□ -0.53
RAPGEF3-211ENST00000488250 BATFQ16520 125 aa11.74□□□□□ -0.53
RAPGEF3-211ENST00000488250 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
RAPGEF3-211ENST00000488250 G0S2P27469 103 aa11.74□□□□□ -0.53
RAPGEF3-211ENST00000488250 PTH2Q96A98 100 aa11.74□□□□□ -0.53
RAPGEF3-211ENST00000488250 JMJD8Q96S16 334 aa11.74□□□□□ -0.53
RAPGEF3-211ENST00000488250 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 LINC01549A6NIU2 74 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 VCYO14598 125 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 DLEU1O43261 78 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 FGF6P10767 208 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 ODF3L2Q3SX64 289 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 ZNF876PQ49A33 203 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 STPG4Q8N801 248 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 HHLA3Q9XRX5 114 aa11.73□□□□□ -0.53
RAPGEF3-211ENST00000488250 A0A087WX48 190 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 F5H697 171 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 M0QY20 66 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 DPM2O94777 84 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 IGKCP01834 107 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 PROK1P58294 105 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 EDA2RQ9HAV5 297 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 TP73-AS1Q9UF72 201 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 NF1P21359 2839 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 BOD1L2Q8IYS8 172 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 SCGB3A1Q96QR1 104 aa11.72□□□□□ -0.53
RAPGEF3-211ENST00000488250 HINT1P49773 126 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF3-211ENST00000488250 FAM74A4Q5TZK3 123 aa11.71□□□□□ -0.53
RAPGEF3-211ENST00000488250 C2orf66Q6UXQ4 117 aa11.71□□□□□ -0.53
RAPGEF3-211ENST00000488250 ZMAT5Q9UDW3 170 aaKnown RBP11.71□□□□□ -0.53
RAPGEF3-211ENST00000488250 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 INSP01308 110 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 SMR3AQ99954 134 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 MTORP42345 2549 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 SDHAF1A6NFY7 115 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 ZNF56Q15929 161 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 C12orf54Q6X4T0 127 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 C2orf91Q6ZV80 131 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 ERASQ7Z444 233 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 MRPL35Q9NZE8 188 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-211ENST00000488250 HIVEP1P15822 2718 aa11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 M0R2P5 195 aa11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 SIVA1O15304 175 aa11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 LY6G6DO95868 133 aa11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 PLNP26678 52 aa11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 NEXN-AS1Q8NBZ9 246 aa11.69□□□□□ -0.54
RAPGEF3-211ENST00000488250 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 ZFP2Q6ZN57 461 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 A8MWV9 139 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 H7C1H1 209 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 STHQ8IWL8 128 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 LINC00469Q8N7U9 141 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 C11orf72Q8NBR9 251 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms