RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MLST8Q9BVC4 326 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 SAMD10Q9BYL1 202 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 PARLQ9H300 379 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 IL36BQ9NZH7 164 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 Q9UF83 564 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 PKHD1P08F94 4074 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 DNAH2Q9P225 4427 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 FAT2Q9NYQ8 4349 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 RAB19A4D1S5 217 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 IGLV2-8P01709 118 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 S100A9P06702 114 aaKnown RBP4.89□□□□□ -1.63
UBE4B-209ENST00000487244 BCL2P10415 239 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 SRIP30626 198 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 MEF2BQ02080 365 aaPredicted RBP4.89□□□□□ -1.63
UBE4B-209ENST00000487244 SLAQ13239 276 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 CENPWQ5EE01 88 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 DNLZQ5SXM8 178 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 UFSP1Q6NVU6 142 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 NEGR1Q7Z3B1 354 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 BAGE2Q86Y30 109 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 WFDC10BQ8IUB3 73 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
UBE4B-209ENST00000487244 DNAH17Q9UFH2 4485 aa4.88□□□□□ -1.63
UBE4B-209ENST00000487244 A0A087WWL8 130 aa4.88□□□□□ -1.63
UBE4B-209ENST00000487244 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
UBE4B-209ENST00000487244 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
UBE4B-209ENST00000487244 M0R381 172 aa4.88□□□□□ -1.63
UBE4B-209ENST00000487244 C6orf223Q8N319 242 aa4.88□□□□□ -1.63
UBE4B-209ENST00000487244 C14orf178Q8N769 122 aaPredicted RBP4.88□□□□□ -1.63
UBE4B-209ENST00000487244 OR10AG1Q8NH19 301 aa4.88□□□□□ -1.63
UBE4B-209ENST00000487244 PCNPQ8WW12 178 aaKnown RBP4.88□□□□□ -1.63
UBE4B-209ENST00000487244 PKD1P98161 4303 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 TRBV6-4A0A1B0GX49 114 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 A8MWV9 139 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 TEX46H3BTG2 121 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 SIVA1O15304 175 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 GZMBP10144 247 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 MGST1P10620 155 aaKnown RBP4.87□□□□□ -1.63
UBE4B-209ENST00000487244 RHOHQ15669 191 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 SOHLH1Q5JUK2 328 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 PIK3CD-AS1Q5SR53 167 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 FAM74A4Q5TZK3 123 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 TXNDC17Q9BRA2 123 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 MED9Q9NWA0 146 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 VAX2Q9UIW0 290 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 PHLDA3Q9Y5J5 127 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 TNFRSF18Q9Y5U5 241 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 KIAA1109Q2LD37 5005 aa4.87□□□□□ -1.63
UBE4B-209ENST00000487244 C19orf71A6NCJ1 209 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 GAGE12JA6NER3 117 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 PDE6DO43924 150 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 IFNA1P01562 189 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 CRYGDP07320 174 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 LINC00694P0DN24 101 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 GNG4P50150 75 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 LINC00315P59091 139 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 SSTP61278 116 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 GAGE1Q13065 139 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 GAGE4Q13068 117 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 GAGE5Q13069 117 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 TTC32Q5I0X7 151 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 ZFP2Q6ZN57 461 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 Q6ZRN7 208 aaPredicted RBP4.86□□□□□ -1.63
UBE4B-209ENST00000487244 ZFP82Q8N141 532 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 SFRP2Q96HF1 295 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 PRADC1Q9BSG0 188 aa4.86□□□□□ -1.63
UBE4B-209ENST00000487244 A0A1W2PPQ1 181 aa4.85□□□□□ -1.63
UBE4B-209ENST00000487244 RBFOX3A6NFN3 312 aa4.85□□□□□ -1.63
UBE4B-209ENST00000487244 K7EN84 100 aa4.85□□□□□ -1.63
UBE4B-209ENST00000487244 SNAI2O43623 268 aa4.85□□□□□ -1.63
UBE4B-209ENST00000487244 CIDEAO60543 219 aa4.85□□□□□ -1.63
UBE4B-209ENST00000487244 CXCL1P09341 107 aa4.85□□□□□ -1.63
UBE4B-209ENST00000487244 LYPD6BQ8NI32 183 aa4.85□□□□□ -1.63
UBE4B-209ENST00000487244 RHODO00212 210 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 OR5AL1P0C617 328 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 IGLC6P0CF74 106 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 DNAH10OSP0CZ25 163 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 TIRAPP58753 221 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 BLOC1S1P78537 153 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 SH2D6Q7Z4S9 175 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 OR2D3Q8NGH3 330 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 ATP6V0E2Q8NHE4 81 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 TPPP3Q9BW30 176 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 MSRB1Q9NZV6 116 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 LY96Q9Y6Y9 160 aa4.84□□□□□ -1.63
UBE4B-209ENST00000487244 IGHV3-38A0A0C4DH36 116 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 P01737 135 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 IGHV3-30P01768 117 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 IGHV3-33P01772 117 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 IGHV3-30-3P0DP02 117 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 IGHV3-30-5P0DP03 117 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 FUSP35637 526 aaKnown RBP eCLIP4.83□□□□□ -1.64
UBE4B-209ENST00000487244 TAGLN2P37802 199 aaKnown RBP4.83□□□□□ -1.64
UBE4B-209ENST00000487244 CEBPGP53567 150 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 ZNF56Q15929 161 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 OR10J3Q5JRS4 329 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 FER1L6-AS1Q8NA97 138 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms