RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 SSBP1Q04837 148 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 BAXQ07812 192 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 SPCS2Q15005 226 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 TMEM128Q5BJH2 165 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 LINC00526Q96FQ7 95 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 WDR83OSQ9Y284 106 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 CARHSP1Q9Y2V2 147 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 USH2AO75445 5202 aa7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 GCGP01275 180 aa7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 MBPP02686 304 aaPredicted RBP7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 FAM162BQ5T6X4 162 aa7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 CMTM2Q8TAZ6 248 aa7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 C15orf40Q8WUR7 153 aa7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 PHLDA3Q9Y5J5 127 aa7.1□□□□□ -1.27
ATPAF1-205ENST00000487193 IGLV4-60A0A075B6I1 120 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 SFT2D2O95562 160 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 C9orf116Q5BN46 136 aaPredicted RBP7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 MZT2AQ6P582 158 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 NEXN-AS1Q8NBZ9 246 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 OR10G8Q8NGN5 311 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 DERL1Q9BUN8 251 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 MIXL1Q9H2W2 232 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 UQCC1Q9NVA1 299 aa7.09□□□□□ -1.27
ATPAF1-205ENST00000487193 TRBV25-1A0A075B6N4 114 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 GVQW2A0A096LPI5 108 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 UBE2L5PA0A1B0GUS4 154 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 OR7C2O60412 319 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 CST7O76096 145 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 SULT1A2P50226 295 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 TAS2R30P59541 319 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 CTF1Q16619 201 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 MITD1Q8WV92 249 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 SFRP2Q96HF1 295 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 CARD19Q96LW7 228 aa7.08□□□□□ -1.28
ATPAF1-205ENST00000487193 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 C7orf66A4D0T2 115 aa7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 H3BVH4 76 aa7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 FGF7P21781 194 aa7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 PPP1R1AQ13522 171 aa7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 NDFIP1Q9BT67 221 aa7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 OR5AC2Q9NZP5 309 aa7.07□□□□□ -1.28
ATPAF1-205ENST00000487193 IGKV3D-20A0A0C4DH25 116 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 BCAP31P51572 246 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 GNG5P63218 68 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 ZNF674Q2M3X9 581 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 TMEM97Q5BJF2 176 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 SPANXN2Q5MJ10 180 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 LINC00173Q6ZV60 143 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 OR11H4Q8NGC9 324 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 PPDPFQ9H3Y8 114 aa7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 LYRM2Q9NU23 88 aaPredicted RBP7.06□□□□□ -1.28
ATPAF1-205ENST00000487193 TRBV6-1A0A0K0K1D8 114 aa7.05□□□□□ -1.28
ATPAF1-205ENST00000487193 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
ATPAF1-205ENST00000487193 UBE2L3P68036 154 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-205ENST00000487193 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
ATPAF1-205ENST00000487193 SMIM4Q8WVI0 70 aa7.05□□□□□ -1.28
ATPAF1-205ENST00000487193 GSKIPQ9P0R6 139 aa7.05□□□□□ -1.28
ATPAF1-205ENST00000487193 TRAV6A0A075B6T7 132 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 LOC107984640A0A0U1RRK4 108 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 M0R381 172 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 ARMS2P0C7Q2 107 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 NCS1P62166 190 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 MRPS10P82664 201 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 ZFP69Q49AA0 526 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 LINC00337Q8N6G1 96 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 AQP10Q96PS8 301 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 NAA50Q9GZZ1 169 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 OTORQ9NRC9 128 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 IL36BQ9NZH7 164 aa7.04□□□□□ -1.28
ATPAF1-205ENST00000487193 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
ATPAF1-205ENST00000487193 L7N2F9 121 aa7.03□□□□□ -1.28
ATPAF1-205ENST00000487193 VBP1P61758 197 aa7.03□□□□□ -1.28
ATPAF1-205ENST00000487193 VAMP2P63027 116 aa7.03□□□□□ -1.28
ATPAF1-205ENST00000487193 SMUG1Q53HV7 270 aa7.03□□□□□ -1.28
ATPAF1-205ENST00000487193 FAM74A1Q5RGS3 127 aa7.03□□□□□ -1.28
ATPAF1-205ENST00000487193 SDHCQ99643 169 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-205ENST00000487193 A0A087X002 238 aa7.02□□□□□ -1.29
ATPAF1-205ENST00000487193 BCL2P10415 239 aa7.02□□□□□ -1.29
ATPAF1-205ENST00000487193 RAB4BP61018 213 aa7.02□□□□□ -1.29
ATPAF1-205ENST00000487193 SYCNQ0VAF6 134 aa7.02□□□□□ -1.29
ATPAF1-205ENST00000487193 ZNF56Q15929 161 aa7.02□□□□□ -1.29
ATPAF1-205ENST00000487193 IQCJQ1A5X6 159 aa7.02□□□□□ -1.29
ATPAF1-205ENST00000487193 CHCHD10Q8WYQ3 142 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-205ENST00000487193 A0A1B0GUV1 79 aa7.01□□□□□ -1.29
ATPAF1-205ENST00000487193 GRIFINA4D1Z8 144 aa7.01□□□□□ -1.29
ATPAF1-205ENST00000487193 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
ATPAF1-205ENST00000487193 IAH1Q2TAA2 248 aaPredicted RBP7.01□□□□□ -1.29
ATPAF1-205ENST00000487193 MCFD2Q8NI22 146 aa7.01□□□□□ -1.29
ATPAF1-205ENST00000487193 NPCDR1Q9BY65 106 aa7.01□□□□□ -1.29
ATPAF1-205ENST00000487193 MBD2Q9UBB5 411 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms