RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CBLN1P23435 193 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 SDC2P34741 201 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 FOXA3P55318 350 aaPredicted RBP4.94□□□□□ -1.62
HDAC3-209ENST00000486618 ZNF90Q03938 601 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 Q6ZS49 121 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 C6orf201Q7Z4U5 140 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 TMEM61Q8N0U2 210 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 C10orf126Q8N4M7 172 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 ZNF709Q8N972 641 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 OR51H1Q8NH63 302 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 ATP6V0E2Q8NHE4 81 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 GNPNAT1Q96EK6 184 aaPredicted RBP4.94□□□□□ -1.62
HDAC3-209ENST00000486618 PGLYRP4Q96LB8 373 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 AQP10Q96PS8 301 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 NPVFQ9HCQ7 196 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 V9GY05 133 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 IGKV1D-13A0A0B4J2D9 117 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 TEX48A0A1B0GUV7 120 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 IGLC7A0M8Q6 106 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 NAPSAO96009 420 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 HRASP01112 189 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 IGLV2-23P01705 113 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 TRGC2P03986 189 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 FCGR3AP08637 254 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 IGKV1-13P0DP09 117 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 DEFA4P12838 97 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 DEFB135Q30KP9 77 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 C9orf153Q5TBE3 101 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 XAF1Q6GPH4 301 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 ZNF880Q6PDB4 577 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 NOTCH2NLQ7Z3S9 236 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 GPHB5Q86YW7 130 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 OTORQ9NRC9 128 aa4.93□□□□□ -1.62
HDAC3-209ENST00000486618 TAX1BP3O14907 124 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 PROP1O75360 226 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 GABARAPO95166 117 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 CFDP00746 253 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-209ENST00000486618 APELAP0DMC3 54 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 Q0VG73 95 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 LINC00242Q5T6M2 205 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 VSTM2AQ8TAG5 236 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 DPH3Q96FX2 82 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 AK3Q9UIJ7 227 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 KIAA1109Q2LD37 5005 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 DNAH10Q8IVF4 4471 aa4.92□□□□□ -1.62
HDAC3-209ENST00000486618 TRBV6-6A0A0A6YYG2 114 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 C3orf85A0A1B0GTC6 90 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BKO60814 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 PRH1P02810 166 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BJP06899 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BOP23527 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BBP33778 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 MFAP2P55001 183 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BDP58876 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 LINC00205P59089 165 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BCP62807 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST2H2BEQ16778 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 C15orf32Q32M92 178 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 LGALSLQ3ZCW2 172 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-209ENST00000486618 ATOH7Q8N100 152 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BHQ93079 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 LINC00526Q96FQ7 95 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 C17orf77Q96MU5 243 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BNQ99877 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 HIST1H2BMQ99879 126 aa4.91□□□□□ -1.62
HDAC3-209ENST00000486618 TRAV9-1A0A075B6T8 112 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 A8MWV9 139 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 F8W1H4 67 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 UBE2L6O14933 153 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 PSPHP1O15172 72 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 SFT2D2O95562 160 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 PYYP10082 97 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 FCGR2CP31995 323 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 NMUP48645 174 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 MP68P56378 58 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 NANOS2P60321 138 aaKnown RBP4.9□□□□□ -1.63
HDAC3-209ENST00000486618 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
HDAC3-209ENST00000486618 ERCC8Q13216 396 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 TDRG1Q3Y452 100 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 Q56UQ5 140 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 SLC25A34Q6PIV7 304 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 LINC00305Q7Z4B0 112 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 C11orf72Q8NBR9 251 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 OR11H7Q8NGC8 314 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 OR4A5Q8NH83 315 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 OSR1Q8TAX0 266 aaPredicted RBP4.9□□□□□ -1.63
HDAC3-209ENST00000486618 FAM3DQ96BQ1 224 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 RNF185Q96GF1 192 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 CYYR1Q96J86 154 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 C2orf50Q96LR7 162 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 HIST1H4GQ99525 98 aa4.9□□□□□ -1.63
HDAC3-209ENST00000486618 C11orf68Q9H3H3 251 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms